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. 2024 Mar 24;13(4):295. doi: 10.3390/antibiotics13040295

Table 1.

Genes encoding for carbapenemase production in Enterobacterales reported in Africa by geographical region. PT, phenotypic test; PCR, polymerase chain reaction; Seq, sequencing methods; PFGE, pulsed-field gel electrophoresis; Lat. fl., lateral flow immunochromatographic test; SCM, screening culture media; SChM, selective chromogenic media for CP-GNB; SM, selective media.

African Region Country No. of Studies per Country Genes Identified Genes Identified/Region Detection Method for CP Countries Not Represented in Table
Northern Africa Algeria 8 blaNDM-5, blaVIM-19, blaOXA-48 bla IMI-2
bla KPC
bla KPC-2
bla IMP
bla IMP-1
bla IMP-4
bla NDM
bla NDM-1
bla NDM-4
bla NDM-5
bla NDM-6
bla NDM-7
bla VIM
bla VIM-1
bla VIM-2
bla VIM-19
bla OXA-48
bla OXA-204
bla OXA-232
PT, PCR, Seq Canary Islands Madeira Islands
Egypt 6 blaKPC, blaIMP, blaNDM, blaNDM-1, blaVIM, blaVIM-2, blaIMP-4, blaOXA-48 PT, PCR, PFGE, Seq
Libya 5 blaNDM-1, blaOXA-48 PT, PCR, Seq
Morocco 11 blaIMP-1, blaNDM, blaNDM-1, blaNDM-7, blaOXA-48 SCM, PT, Lat. fl., PCR, Seq
Sudan 4 blaKPC, blaVIM, blaIMP, blaNDM, blaNDM-1, blaNDM-4, blaNDM-5, blaNDM-6, blaOXA-48, blaOXA-232 PT, PCR, Seq
Tunisia 14 blaIMI-2, blaKPC-2, blaNDM-1, blaVIM-1, blaOXA-48, blaOXA-204 PT, PCR, PFGE, Seq
Eastern Africa Djibouti 1 blaNDM-1, blaNDM-5, blaOXA-48, blaOXA-181 bla KPC
bla KPC-2
bla IMP
bla IMP-10
bla NDM
bla NDM-1
bla NDM-4
bla NDM-5
bla NDM-7
bla VIM
bla OXA-23
bla OXA-48-like
bla OXA-48
bla OXA-181
bla OXA-232
SChM, PT, Lat. fl., Seq Burundi
Comoros
Eritrea
Reunion
Rwanda
Seychelles
South Sudan
Zambia
Zimbabwe
Ethiopia 14 blaKPC, blaNDM, blaNDM-1, blaNDM-5, blaOXA-181 SChM, PT, PCR, PFGE, Seq
Kenya 5 blaNDM, blaNDM-1, blaNDM-5, blaNDM-7, blaVIM, blaOXA-48, blaOXA-181, blaOXA-232 PT, PCR, PFGE, Seq
Madagascar 2 blaNDM-1, blaNDM-4, blaNDM-5 PT, PCR, PFGE, Seq
Malawi 1 blaKPC-2, blaNDM-5, blaOXA-48 SCM, PT
Mauritius 2 blaIMP-10, blaNDM-1, blaNDM-5, blaNDM-7, blaOXA-181 PT, PCR, PFGE, Seq
Mozambique 1 bla NDM-5 Seq
Somalia 1 blaNDM, blaOXA-23, blaVIM Seq
Tanzania 3 blaKPC, blaNDM, blaIMP, blaVIM, blaOXA-48 SCM, PCR
Uganda 5 blaKPC, blaIMP, blaNDM, blaVIM, blaOXA-48-like PCR
Southern Africa Botswana 1 - bla GES-5
bla KPC
bla KPC-2
bla KPC-3
bla NDM
bla NDM-1
bla NDM-2
bla NDM-7
bla VIM
bla OXA-48-like
bla OXA-48
bla OXA-181
bla OXA-232
bla OXA-484
SChM, Unidentified genotypic method Lesotho
Swaziland
Namibia 1 - -
South Africa 15 blaGES-5, blaKPC, blaKPC-2, blaKPC-3, blaNDM, blaNDM-1, blaNDM-2, blaNDM-7, blaVIM, blaOXA-48-like, blaOXA-48, blaOXA-181, blaOXA-232, blaOXA-484 SCM, PCR, PFGM, SEQ
Central Africa Angola 2 blaNDM-1, blaNDM-5, blaOXA-181 bla KPC
bla AIM-1
bla IMP
bla IMP-11
bla IMP-12
bla NDM
bla NDM-1
bla NDM-4
bla NDM-5
bla NDM-7
bla VIM
bla OXA-48
bla OXA-181
PCR, Seq Cabinda (Angola)
Central African Republic
Equatorial Guinea
Cameroon 1 blaAIM-1, blaIMP-11, blaIMP-12, blaNDM-1, blaNDM-4 PCR, Seq
Chad 1 blaNDM-5, blaOXA-181 PCR, Seq
Democratic Republic of Congo 1 blaKPC, blaIMP, blaNDM, blaVIM, blaOXA-48 PCR, Seq
Gabon 2 blaNDM-5, blaNDM-7, blaOXA-48 PCR, Seq
Republic of Congo 1 bla OXA-181 PCR, Seq
São Tomé and Príncipe 1 bla OXA-181 PT, PCR, PFGE, Seq
Western Africa Benin 2 bla GES bla GES
bla KPC
bla IMP
bla NDM
bla NDM-1
bla NDM-5
bla NDM-7
bla VIM
bla OXA-48-like
bla OXA-48
bla OXA-58-like
bla OXA-58
bla OXA-64
bla OXA-65
bla OXA-71
bla OXA-98
bla OXA-181
bla OXA-232
bla OXA-241
bla OXA-244
Seq Cote D’Ivoire
Guinea
Guinea-Bissau
Liberia
Mauritania
Niger
The Gambia
Togo
Burkina Faso 2 blaGES, blaIMP, blaNDM, blaVIM, blaOXA-48-like, blaOXA-58-like Lat. fl., Seq
Cape Verde 1 blaOXA-48, blaOXA-181, blaOXA-244 PCR, Seq
Ghana 6 blaKPC, blaNDM, blaNDM-1, blaOXA-48-like, blaOXA-48, blaOXA-181 SM, PT, PCR, Seq
Mali 2 blaNDM-1, blaOXA-181 PT, PCR, Seq
Nigeria 11 blaGES, blaNDM, blaNDM-1, blaNDM-5, blaNDM-7, blaVIM, blaOXA-48, blaOXA-181, blaOXA-232 SCM, PT, Lat. fl., PCR, Seq
Senegal 1 bla OXA-48 PT, PCR
Sierra Leone 1 blaOXA-58, blaOXA-64, blaOXA-65, blaOXA-71, blaOXA-98, blaOXA-241 PCR, Seq
Sub-Saharan Africa - 2 blaKPC, blaNDM, blaVIM, blaVIM-2, blaOXA-48, blaOXA-181, blaOXA-232 bla KPC
bla NDM
bla VIM
bla VIM-2
bla OXA-48
bla OXA-181
bla OXA-232
PT, PCR, Seq