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. 2024 Apr 18;15(4):505. doi: 10.3390/genes15040505

Table 5.

Screening Performance Metrics of Extracardiac Anomalies (ECA) Status for Genetic Diagnoses Identified in Congenital Heart Disease.

Variable Genetic Diagnosis (n) Predictive Values (%) for ECA Status Clinical Utility Index (CUI) for ECA Status
(Positive and Negative)
ECA Status Yes No
Yes 166 267 ECA(+) = 0.3834
(38.3%)
CUI(+) = 0.2608 *
No 78 502 ECA(−) = 0.8655
(86.6%)
CUI(−) = 0.5650 *
PSI = 0.2489
(24.9%) **
SUI = 0.8258 †
Screening Metrics of ECA Status
Sensitivity 0.6803
Specificity 0.6528
Accuracy 0.6594
Youden Index 0.3331
Number Needed to Diagnose (NND) 3.00
Evaluation of ECA Status as
Predictor of Genetic Diagnoses
Wald X2
(p-value)
Odds Ratio [95% CI] AUC [95% CI] Brier Score
ECA Status
(positive vs. negative)
78.2
(p < 0.0001)
4.0
[2.9, 5.4]
0.667 [0.633, 0.700] 0.168

* CUI: Clinical Utility Index for positive and negative ECA status (CUI(+) and CUI(−), respectively); CUI(+) is calculated by [sensitivity*PPV] and CUI(−) is calculated by [specificity*NPV]. † SUI: Summary Utility Index = ΣCUI(+, −) ** Predictive Summary Index (PSI), an indicator for net gain in certainty of prediction: PPV + NPV-1. A PSI of 24.9% indicates that ECA status adds incrementally to predictive capability, though it is low to moderate. The number needed to predict (NNP) = 1/PSI = 4.0.