Table 3.

A pairwise comparison of Sosuga virus (SOSV) sequence identity (top) and nucleotide differences (bottom), calculated using Geneious Prime, for the Sierra Leone (B1021), Uganda, and Human SOSV sequences. The analysis used to determine the identity and calculate nucleotide differences compared only existing sections from the different sequence fragments (127 bp) while ignoring gaps and missing data.

	Human	B1021	B1271	B1319	B1605	B1624	B926	B1302	B1392	B1450	B1516	B1541	B1571
Human		98.97	99.04	99.28	99.52	99.28	100.00	100.00	99.21	99.21	100.00	100.00	100.00
B1021	158		98.07	98.07	98.31	98.07	96.06	96.06	96.06	96.06	96.06	96.06	96.06
B1271 *	4	8		98.8	99.04	98.8	99.21	99.21	100.00	100.00	99.21	99.21	99.21
B1319 *	3	8	5		99.28	100.00	100.00	100.00	99.21	99.21	100.00	100.00	100.00
B1605 *	2	7	4	3		99.28	100.00	100.00	99.21	99.21	100.00	100.00	100.00
B1624 *	3	8	5	0	3		100.00	100.00	99.21	99.21	100.00	100.00	100.00
B926 **	0	5	1	0	0	0		100.00	99.21	99.21	100.00	100.00	100.00
B1302 **	0	5	1	0	0	0	0		99.21	99.21	100.00	100.00	100.00
B1392 **	1	5	0	1	1	1	1	1		100.00	99.21	99.21	99.21
B1450 **	1	5	0	1	1	1	1	1	0		99.21	99.21	99.21
B1516 **	0	5	1	0	0	0	0	0	1	1		100.00	100.00
B1541 **	0	5	1	0	0	0	0	0	1	1	0		100.00
B1571 **	0	5	1	0	0	0	0	0	1	1	0	0

* Bat, Uganda (HN and NP gene): 415 bp. ** Bat, Uganda (NP gene): 127 bp. Human, Uganda: 15,480 bp. B1021, Sierra Leone: 15,269 bp.