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. 2024 Apr 12;41(4):msae074. doi: 10.1093/molbev/msae074

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© The Author(s) 2024. Published by Oxford University Press on behalf of Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 5. — a) Proportion of genes lost within the sex-linked regions, pseudoautosomal regions, and autosomes in R. hastatulus. Left panel: comparison of genes that are absent from the Y-bearing haplotype B, while present on the X-bearing haplotype A assembly, and vice versa. Right panel: proportion of partially lost versus completely lost genes across regions. b) Proportion of genes lost on Y calculated in 20 gene windows along the X chromosome. c) Proportion of genes lost on Y calculated in 20 gene windows with respect to the positions of their syntenic genes in R. salicifolius scaffolds.