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. Author manuscript; available in PMC: 2024 Apr 30.
Published in final edited form as: Nat Microbiol. 2023 Oct 16;8(11):2033–2049. doi: 10.1038/s41564-023-01493-w

TABLE 1:

Patient demographics and baseline disease characteristics of all patients that produced at least one stool sample. Patients are stratified by liver disease chronicity at the time of consent. Clinically significant portal hypertension was defined by hepatic venous pressure gradient (HVPG) ≥ 10mmHg, characteristic imaging (enlarged portal vein, intraabdominal varices, splenomegaly, or ascites), or clinical features (ascites, varices, or hepatic encephalopathy).

Acute Chronic Cirrhosis (Compensated) Cirrhosis (Decompensated) p
n 35 18 13 196
Basic Demographics Age (median [IQR]) 57.30 [34.00, 67.25] 60.20 [48.57, 64.60] 63.10 [54.90, 69.70] 58.05 [47.62, 65.93] 0.413
Sex = Male (%) 12 ( 34.3) 10 ( 55.6) 9 ( 69.2) 123 ( 62.8) 0.014
Race (%) 0.894
 African American 10 ( 28.6) 8 ( 44.4) 4 ( 30.8) 64 ( 32.7)
 Asian / Pacific Islander 3 ( 8.6) 1 ( 5.6) 1 ( 7.7) 7 ( 3.6)
 Caucasian 17 ( 48.6) 6 ( 33.3) 7 ( 53.8) 95 ( 48.5)
 Hispanic 5 ( 14.3) 2 ( 11.1) 1 ( 7.7) 26 ( 13.3)
 Other 0 ( 0.0) 1 ( 5.6) 0 ( 0.0) 4 ( 2.0)
BMI (median [IQR]) 25.28 [21.61, 28.50] 26.61 [21.84, 32.33] 30.67 [26.75, 34.17] 27.99 [23.62, 33.04] 0.059
Disease Etiology Liver Disease Etiology (%) <0.001
 AIH 5 ( 14.3) 0 ( 0.0) 1 ( 7.7) 6 ( 3.1)
 Alcohol 5 ( 14.3) 1 ( 5.6) 3 ( 23.1) 124 ( 63.3)
 Checkpoint Blockade Hepatitis 4 ( 11.4) 0 ( 0.0) 0 ( 0.0) 1 ( 0.5)
 DILI 6 ( 17.1) 0 ( 0.0) 0 ( 0.0) 0 ( 0.0)
 HBV 0 ( 0.0) 0 ( 0.0) 0 ( 0.0) 3 ( 1.5)
 HCV 0 ( 0.0) 0 ( 0.0) 1 ( 7.7) 15 ( 7.7)
 Metabolic 0 ( 0.0) 0 ( 0.0) 0 ( 0.0) 4 ( 2.0)
 NASH 0 ( 0.0) 1 ( 5.6) 3 ( 23.1) 23 ( 11.7)
 Other 7 ( 20.0) 3 ( 16.7) 2 ( 15.4) 6 ( 3.1)
 PBC 0 ( 0.0) 0 ( 0.0) 0 ( 0.0) 3 ( 1.5)
 PSC 0 ( 0.0) 1 ( 5.6) 0 ( 0.0) 4 ( 2.0)
 Vascular 8 ( 22.9) 12 ( 66.7) 3 ( 23.1) 7 ( 3.6)
Disease Severity MELD-Na at consent (median [IQR]) 10.93 [5.30, 15.47] 10.40 [2.56, 20.19] 13.06 [4.74, 19.98] 21.30 [13.46, 31.92] <0.001
Clinically Significant Portal HTN (%) 2 ( 5.7) 2 ( 11.1) 5 ( 38.5) 174 ( 88.8) <0.001
HCC (%) 1 ( 2.9) 1 ( 5.6) 3 ( 23.1) 22 ( 11.2) 0.171
NACSELD-ACLF at Consent (%) 0 (0.0) 0 (0.0) 0 (0.0) 29 ( 14.8) 0.012
Hepatic Enceaphalopathy (%) 2 ( 5.7) 1 ( 5.6) 0 (0.0) 56 ( 28.6) 0.001
Shock (%) 2 ( 5.7) 3 ( 16.7) 1 ( 7.7) 26 ( 13.3) 0.54
Respiratory Failure (%) 1 ( 2.9) 1 ( 5.6) 1 ( 7.7) 25 ( 12.8) 0.29
Renal Failure (%) 1 ( 2.9) 0 ( 0.0) 0 ( 0.0) 24 ( 12.2) 0.081
Medications and Diet Lactulose
PTA (%) 1 ( 2.9) 2 ( 11.1) 0 ( 0.0) 85 ( 43.6) <0.001
Inpatient (%) 7 ( 20.0) 5 ( 27.8) 5 ( 38.5) 148 ( 75.9) <0.001
Rifaximin
PTA (%) 0 ( 0.0) 1 ( 5.6) 0 ( 0.0) 60 ( 30.8) <0.001
Inpatient (%) 5 ( 14.3) 1 ( 5.6) 2 ( 15.4) 103 ( 52.8) <0.001
Broad Antibiotics (non-rifaximin)
PTA (%) 5 ( 14.3) 3 ( 16.7) 1 ( 7.7) 52 ( 26.7) 0.169
Inpatient (%) 10 ( 28.6) 4 ( 22.2) 5 ( 38.5) 80 ( 41.0) 0.263
Diet at time of consent (%) 0.52
 Diet Order 31 ( 88.6) 15 ( 83.3) 13 (100.0) 155 ( 79.5)
 NPO 4 ( 11.4) 3 ( 16.7) 0 ( 0.0) 37 ( 19.0)
 Tube Feeds 0 ( 0.0) 0 ( 0.0) 0 ( 0.0) 3 ( 1.5)
Disease Complications SBP (%) 0 ( 0.0) 1 ( 5.6) 0 ( 0.0) 20 ( 10.2) 0.133
Bacteremia (%) 2 ( 5.7) 2 ( 11.1) 0 (0.0) 15 ( 7.7) 0.663
90-day Survival (%) 33 ( 94.3) 18 ( 100.0) 12 ( 92.3) 155 ( 79.1) 0.02