Table 1.
Mfr secretion signals identified by SignalP 6.0 server. All Mfr ORFs were evaluated. Signal sequences are shown divided by their three characteristic regions: the positively charged, the hydrophobic transmembrane and the polar at the C-terminal. The added residues after the post-cleavage sites also appear. Tested sequences are in bold. Lipobox motifs appear underlined. Membrane anchor means that there is a predicted C-terminal membrane helix that could anchor the protein after cleavage of the signal peptide. Suppl. File 2 summarises the AUC for the secreted proteins
# ID | SP (Sec/SPI) | Signal Peptide | Post-cleavage added sequence | Secretome (MS) | Membrane Anchor/Lipobox | ||
---|---|---|---|---|---|---|---|
Positive charge | Hydrophobic transmembrane | C-terminal | |||||
s55 | 0.85 | MKK | LLTILTTLIGT | SGSISA | VVSCKGG | Yes | Lipobox |
s515 | 0.82 | MK | ITAILSSLFLSPTL | LNT | SPILVNGG | No | Membrane Anchor |
s1260 | 0.58 | MKK | LLSILAICTLATTSILLSPLL | INNNSNNNIVLKA | ETKKEGG | No | Signal Peptide |
s1535 | 0.54 | MNLLKKKKNK | ILAFAILAGLMTSASLGSTVFYSIA | ADNSLA | KDVDSGG | No | Membrane anchor |
s1545 | 0.66 | MNLLKKKKNK | ILAFAILAGLMTSASLGSTVFYSI | ADNSLA | KEVDSGG | Yes | Membrane anchor |
s1575 | 0.53 | MKINKNHSR | LLKLISIVTITSSSIILPSF | LVT | KNQESGG | No | Membrane anchor |
s2165 | 0.99 | MKK | LLTLLTISTLLVI | PTSSS | FLINKGG | No | Signal Peptide |
s3040 | 0.99 | MK | LFLPTLFLLSNSITP | SLA | NSVNVVNGG | No | Membrane Anchor |
s3290 | 0.5 | MKLVKK | LGFLSLSAISILGPL | AA | INNLTDNNGG | Yes | Membrane Anchor |
s3620 | 0.61 | MKK | VLGITLLGSII | ATASA | SVVSCSVGISLDGG | No | Lipobox |
s3960 | 0.48 | MKK | LLALLAVTSILT | SSGITY | VIHENGG | Yes | Signal Peptide |
s3965 | 0.78 | MKK | LLAVLIGLTLFTT | SGVSYV | AYDNIGG | Yes | Signal Peptide |