Table 2.
VP1 coding sequences of O/ME-SA/Ind-2001e FMDVs generated in this study.
| Name | Collected date | Country | Host | Id (%) | Accession no. | References |
|---|---|---|---|---|---|---|
| CJ/SKR/1/2023 | May-23 | Republic of Korea | Cattle | Ref | PP156917 | This study |
| CJ/SKR/2/2023 | May-23 | Republic of Korea | Cattle | 100 | – | This study |
| CJ/SKR/3/2023 | May-23 | Republic of Korea | Cattle | 100 | – | This study |
| CJ/SKR/5/2023 | May-23 | Republic of Korea | Cattle | 100 | – | This study |
| CJ/SKR/7/2023 | May-23 | Republic of Korea | Cattle | 99.84 | PP1569179 | This study |
| JP2/SKR/6/2023 | May-23 | Republic of Korea | Cattle | 99.68 | PP1569178 | This study |
| JP/SKR/9/2023 | May-23 | Republic of Korea | Cattle | 100 | – | This study |
| CJ/SKR/11/2023 | May-23 | Republic of Korea | Cattle | 100 | – | This study |
| JE/SKR/2017 | February-17 | Republic of Korea | Cattle | 96.37 | KY766149.1 | – |
| BE/SKR/2017 | February-17 | Republic of Korea | Cattle | 95.73 | KY766147.1 | – |
| AS/SKR/2019 | January-19 | Republic of Korea | Cattle | 94.79 | n/a | APQA |
| MOG/1/2021 | March-21 | Mongolia | n/a | 99.21 | n/a | WRLFMD |
| MOG/4/2021 | March-21 | Mongolia | n/a | 99.05 | n/a | WRLFMD |
| LAO/3/2020 | January-20 | Lao PDR | Cattle | 98.89 | n/a | WRLFMD |
| TAI/4/2020 | May-20 | Thailand | Cattle | 98.89 | n/a | WRLFMD |
| VIT/7/2020 | January-20 | Vietnam | Pig | 98.89 | n/a | WRLFMD |
| VIT/28/2019 | November-19 | Vietnam | Water buffalo | 98.89 | n/a | WRLFMD |
| MAY/35/2020 (2) | January-20 | Malaysia | Cattle | 98.89 | n/a | WRLFMD |
| CAM36/2019 | October-19 | Cambodia | Cattle | 98.89 | n/a | APQA |
| CAM39/2019 | December-19 | Cambodia | Cattle | 98.89 | n/a | APQA |
| LAO1/2020 | January-20 | Lao PDR | Cattle | 98.89 | n/a | APQA |
| VIT1/2020 | January-20 | Vietnam | Cattle | 98.89 | n/a | APQA |
| MOG/2/2021 | March-21 | Mongolia | 98.74 | n/a | WRLFMD | |
| MOG/Khentii/2021 | December-21 | Mongolia | Cattle | 98.74 | ON982228.1 | Viktor et al. (27) |
| CAM30/2019 | January-19 | Cambodia | Cattle | 98.74 | MZ634456.1 | Ryoo et al. (28) |
| MAY/453/20 (2) | February-20 | Malaysia | – | 98.74 | n/a | WRLFMD |
| LAO/1/2020 | – | Lao PDR | – | 98.74 | n/a | WRLFMD |
| MAY/127/2020 | – | Malaysia | – | 98.74 | n/a | WRLFMD |
| MAY/9/2020 | – | Malaysia | – | 98.74 | n/a | WRLFMD |
| VIT/23/2019 | – | Vietnam | – | 98.74 | n/a | WRLFMD |
| VIT/22/2019 | – | Vietnam | – | 98.74 | n/a | WRLFMD |
| VIT/21/2019 | – | Vietnam | – | 98.74 | n/a | WRLFMD |
| MOG/17/2021 | – | Mongolia | – | 98.74 | n/a | WRLFMD |
| MOG/2/2022 | – | Mongolia | – | 98.74 | n/a | WRLFMD |
| CAM29/2019 | January-19 | Cambodia | Cattle | 98.54 | MZ634455.1 | Ryoo et al. (28) |
| MOG/Khovd/2021 | December-21 | Mongolia | Cattle | 98.26 | ON9822298.1 | Viktor et al. (27) |
| CAM22/2019 | January-19 | Cambodia | Cattle | 98.10 | MZ634454.1 | Ryoo et al. (28) |
| MOG/Sukhbaatar/2021 | December-21 | Mongolia | Cattle | 97.95 | ON982230.1 | Viktor et al. (27) |
| Orenburg/RUS/2021 | December-21 | Russia | Cattle | 97.16 | ON982231.1 | Viktor et al. (27) |
| KAZ/2022 | January-22 | Kazahstan | Cattle | 96.37 | ON982227.1 | Viktor et al. (27) |
Includes FMDV VP1 coding sequences from neighboring East and Southeast Asian countries with more than 95% sequence identity to the CJ/SKR/1/2023 isolate from Chungbuk province.