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. 2024 Apr 19;13:e85579. doi: 10.7554/eLife.85579

Figure 4. The C-terminal mini-domain of PBP4 directly interacts with GpsB.

(A) Domain representation of the four/five S. aureus (COL)/methicillin-resistant S. aureus (MRSA) (USA300) penicillin-binding proteins (PBPs). Each protein is shown from the N-terminus (left) to the C-terminus (right). All four transpeptidase PBPs - PBP1, PBP2, PBP3, and PBP2a - lack a GpsB recognition motif on their N-terminal, cytosolic mini-domain. In contrast, the C-terminal mini-domain of PBP4, the sole S. aureus class C PBP, contains this motif (NRLFRKRK, red). The dissociation constants were determined with SPR (n=2). (B) Crystal structure of Sa GpsB R24A in complex with PBP4 C-terminal peptide fragment at 2.40 Å resolution. The middle panel includes the electron density map of the Sa PBP4 heptapeptide, 2Fo-Fc=1.0σ. The right panel shows a superimposition of the Bs PBP1 mini-domain from the Bs GpsB+PBP1 complex (PDB ID 6GP7, purple) highlighting similar binding features.

Figure 4.

Figure 4—figure supplement 1. The crystal packing interface of Sa GpsB dimers form interactions that mimic those between GpsB-PBP pairs.

Figure 4—figure supplement 1.

(A) Sa GpsB dimers assemble in a head-to-head, antiparallel arrangement, where the membrane-binding loop interacts with the PBP-binding groove of the other. (B) Enhanced viewpoint of the crystal packing interactions. 2Fo-Fc map, shown in gray, is contoured at 1.0σ. R28, R24, and K18 adopt similar interactions with the negatively charged PBP-binding groove, as the arginine fingers of (C, D) of Bs PBP1a with Bs GpsB (6GP7). PBP, penicillin-binding protein.
Figure 4—figure supplement 2. Surface plasmon resonance (SPR) titration of Sa FtsZ C-terminal peptides against Sa GpsBΔMADFL.

Figure 4—figure supplement 2.

KD values are reported in Supplementary file 2.
Figure 4—figure supplement 3. AlphaFold2-Multimer prediction of GpsB:FtsZ385-390 complex (cyan) superimposed onto the GpsB:PBP4 peptide crystal structure (green:orange).

Figure 4—figure supplement 3.

FtsZ residues are labeled. PBP, penicillin-binding protein.