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. 2024 Apr 11;43(4):114103. doi: 10.1016/j.celrep.2024.114103
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal anti-HIF1α BD Transduction Laboratories Cat#610959; RRID: AB_398272
Mouse monoclonal anti-CAIX Santa Cruz Biotechnology Cat#sc-365900; RRID: AB_10846466
Monoclonal anti-β-actin-peroxidase Sigma-Aldrich Cat#A3854; RRID: AB_262011
Rabbit polyclonal anti-HIF-1α (C-Term) Cayman Chemical Cat#10006421; RRID: AB_409037
Rabbit polyclonal anti- PDK1 Enzo Life Sciences, Inc. Cat#ADI-KAP-PK112; RRID: AB_10618932
Goat polyclonal anti-HSP 60 Santa Cruz Biotechnology Cat#sc-1722; RRID: AB_2233354
Rabbit polyclonal anti-GAPDH Abcam Cat#ab9485; RRID: AB_307275
Rabbit polyclonal anti-GOT1 Proteintech Cat#14886-1-AP; RRID AB_2113630
Rabbit polyclonal anti-GOT2 Sigma-Aldrich Cat#HPA018139; RRID AB_1849903

Chemicals, peptides, and recombinant proteins

Doxycycline Sigma-Aldrich Cat#D9891
Dimethyloxalylglycine (DMOG) Enzo Life Sciences, Inc. Cat#BML-EI347
Metformin Sigma-Aldrich Cat#D150959
Sodium pyruvate Lonza Cat#BE13-115E
Sodium α-ketobutyrate (αKB) Sigma-Aldrich Cat#K0875
L-Glutamine-5-13 C Cambridge Isotope Laboratories, Inc. Cat#CLM-1166
Protease inhibitors Sigma-Aldrich Cat#P8340
Phosphatase inhibitors Sigma-Aldrich Cat#P5726
Pyridine Sigma-Aldrich Cat#270970
Methoxyamine hydrochloride Sigma-Aldrich Cat#226904
5-3H-Glucose Perkin Elmer Cat#NET531001MC
Dodecyltrimethylammonium bromide (DTAB) Sigma-Aldrich Cat#D8638

Critical commercial assays

L-Lactate Assay Kit (Colorimetric/Fluorometric) Abcam Cat#ab65330
DC protein Assay Kit Bio-Rad Cat#5000112
Pierce™ BCA Protein Assay Kit Thermo Fisher Scientific Cat#23225
NAD/NADH-Glo™ Assay Kit Promega Cat#G9071
Clarity Western ECL Substrate Bio-Rad Cat#1705061
Super-Signal West Femto Maximum Sensitivity Substrate Thermo Fisher Scientific Cat#34096

Experimental models: Cell lines

786-O Provided by Dr. María J. Calzada N/A
G55 Provided by Dr. Till Acker N/A
MDA-MB 231 Provided by Dr. Massimiliano Mazzone N/A
A549 Provided by Dr. Massimiliano Mazzone N/A
Murine embryonic fibroblasts (MEFs) This study N/A

Oligonucleotides

Control siRNA Santa Cruz Biotechnology Cat#sc-37007
HIF1α siRNA Santa Cruz Biotechnology Cat#sc-35561
GAPDH siRNA Santa Cruz Biotechnology Cat#sc-35448
GOT1 siRNA Dharmacon Cat#J-011673
GOT2 siRNA Dharmacon Cat#J-011674

Recombinant DNA

pLVX-TetOne-Puro-Luc Takara Cat#631849
pLVX-TetOne-HIF1α Meléndez-Rodríguez et al.18 N/A
pLVX-TetOne-HIF1α bHLH Meléndez-Rodríguez et al.18 N/A

Other

Pyruvate-free Dulbecco’s high glucose modified Eagle’s Medium (DMEM) Cytiva HyClone™ Cat#SH30022
Pyruvate- and glucose-free Dulbecco’s high glucose modified Eagle′s Medium (DMEM) Gibco™ Cat#11966025
Pyruvate- and glutamine-free Dulbecco’s high glucose modified Eagle’s Medium (DMEM) Gibco™ Cat#11960044
Pyruvate-, glutamine- and glucose-free Dulbecco’s high glucose modified Eagle’s Medium (DMEM) Gibco™ Cat# A1443001
Lipofectamine 2000 Transfection Reagent Invitrogen Cat#11668019
Dialyzed fetal bovine serum (dFBS) Sigma-Aldrich Cat#F0392
Metabolic data from Human ccRCC samples Hakimi et al.30 N/A
Mass spectrometry data This study EMBL-EBI MetaboLights: MTBLS8901 https://www.ebi.ac.uk/metabolights/MTBLS8901