Antibodies |
|
Mouse monoclonal anti-HIF1α |
BD Transduction Laboratories |
Cat#610959; RRID: AB_398272
|
Mouse monoclonal anti-CAIX |
Santa Cruz Biotechnology |
Cat#sc-365900; RRID: AB_10846466
|
Monoclonal anti-β-actin-peroxidase |
Sigma-Aldrich |
Cat#A3854; RRID: AB_262011
|
Rabbit polyclonal anti-HIF-1α (C-Term) |
Cayman Chemical |
Cat#10006421; RRID: AB_409037
|
Rabbit polyclonal anti- PDK1 |
Enzo Life Sciences, Inc. |
Cat#ADI-KAP-PK112; RRID: AB_10618932
|
Goat polyclonal anti-HSP 60 |
Santa Cruz Biotechnology |
Cat#sc-1722; RRID: AB_2233354
|
Rabbit polyclonal anti-GAPDH |
Abcam |
Cat#ab9485; RRID: AB_307275
|
Rabbit polyclonal anti-GOT1 |
Proteintech |
Cat#14886-1-AP; RRID AB_2113630
|
Rabbit polyclonal anti-GOT2 |
Sigma-Aldrich |
Cat#HPA018139; RRID AB_1849903
|
|
Chemicals, peptides, and recombinant proteins |
|
Doxycycline |
Sigma-Aldrich |
Cat#D9891 |
Dimethyloxalylglycine (DMOG) |
Enzo Life Sciences, Inc. |
Cat#BML-EI347 |
Metformin |
Sigma-Aldrich |
Cat#D150959 |
Sodium pyruvate |
Lonza |
Cat#BE13-115E |
Sodium α-ketobutyrate (αKB) |
Sigma-Aldrich |
Cat#K0875 |
L-Glutamine-5-13 C |
Cambridge Isotope Laboratories, Inc. |
Cat#CLM-1166 |
Protease inhibitors |
Sigma-Aldrich |
Cat#P8340 |
Phosphatase inhibitors |
Sigma-Aldrich |
Cat#P5726 |
Pyridine |
Sigma-Aldrich |
Cat#270970 |
Methoxyamine hydrochloride |
Sigma-Aldrich |
Cat#226904 |
5-3H-Glucose |
Perkin Elmer |
Cat#NET531001MC |
Dodecyltrimethylammonium bromide (DTAB) |
Sigma-Aldrich |
Cat#D8638 |
|
Critical commercial assays |
|
L-Lactate Assay Kit (Colorimetric/Fluorometric) |
Abcam |
Cat#ab65330 |
DC protein Assay Kit |
Bio-Rad |
Cat#5000112 |
Pierce™ BCA Protein Assay Kit |
Thermo Fisher Scientific |
Cat#23225 |
NAD/NADH-Glo™ Assay Kit |
Promega |
Cat#G9071 |
Clarity Western ECL Substrate |
Bio-Rad |
Cat#1705061 |
Super-Signal West Femto Maximum Sensitivity Substrate |
Thermo Fisher Scientific |
Cat#34096 |
|
Experimental models: Cell lines |
|
786-O |
Provided by Dr. María J. Calzada |
N/A |
G55 |
Provided by Dr. Till Acker |
N/A |
MDA-MB 231 |
Provided by Dr. Massimiliano Mazzone |
N/A |
A549 |
Provided by Dr. Massimiliano Mazzone |
N/A |
Murine embryonic fibroblasts (MEFs) |
This study |
N/A |
|
Oligonucleotides |
|
Control siRNA |
Santa Cruz Biotechnology |
Cat#sc-37007 |
HIF1α siRNA |
Santa Cruz Biotechnology |
Cat#sc-35561 |
GAPDH siRNA |
Santa Cruz Biotechnology |
Cat#sc-35448 |
GOT1 siRNA |
Dharmacon |
Cat#J-011673 |
GOT2 siRNA |
Dharmacon |
Cat#J-011674 |
|
Recombinant DNA |
|
pLVX-TetOne-Puro-Luc |
Takara |
Cat#631849 |
pLVX-TetOne-HIF1α |
Meléndez-Rodríguez et al.18
|
N/A |
pLVX-TetOne-HIF1α bHLH∗
|
Meléndez-Rodríguez et al.18
|
N/A |
|
Other |
|
Pyruvate-free Dulbecco’s high glucose modified Eagle’s Medium (DMEM) |
Cytiva HyClone™ |
Cat#SH30022 |
Pyruvate- and glucose-free Dulbecco’s high glucose modified Eagle′s Medium (DMEM) |
Gibco™ |
Cat#11966025 |
Pyruvate- and glutamine-free Dulbecco’s high glucose modified Eagle’s Medium (DMEM) |
Gibco™ |
Cat#11960044 |
Pyruvate-, glutamine- and glucose-free Dulbecco’s high glucose modified Eagle’s Medium (DMEM) |
Gibco™ |
Cat# A1443001 |
Lipofectamine 2000 Transfection Reagent |
Invitrogen |
Cat#11668019 |
Dialyzed fetal bovine serum (dFBS) |
Sigma-Aldrich |
Cat#F0392 |
Metabolic data from Human ccRCC samples |
Hakimi et al.30
|
N/A |
Mass spectrometry data |
This study |
EMBL-EBI MetaboLights: MTBLS8901 https://www.ebi.ac.uk/metabolights/MTBLS8901
|