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. 2024 Mar 18;20(5):549–572. doi: 10.1038/s44320-024-00030-z

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the data associated with this article, unless otherwise stated in a credit line to the data, but does not extend to the graphical or creative elements of illustrations, charts, or figures. This waiver removes legal barriers to the re-use and mining of research data. According to standard scholarly practice, it is recommended to provide appropriate citation and attribution whenever technically possible.

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Figure EV2 — (A) Percentage of heterodimers, homomers, and monomers at the end of simulations with distributions of mutational effects structures when the optimal activity (alpha) is set to 60. Structures are listed in the same order as in Fig. 2C. (B) Correlation between the percentages of heterodimers observed at the end of simulations with alpha = 60 (data from Fig. S6A) and simulations with alpha = 80 (data from Fig. 2C). The P value for the Spearman correlation coefficient in panel B is calculated using the asymptotic t approximation method. The P value for the Pearson correlation coefficient is calculated using an asymptotic confidence interval based on Fisher’s Z transform. (C, D) Evolution of ΔG_fold values in simulations with alpha = 60 (C) and alpha = 80 (D). For simplicity, only the data for PDB: 1GPR are shown. (E, F) Evolution of the percentage of heteromers in simulations with alpha = 60 (E) and alpha = 80 (F). Replicates for all simulations with all structures are shown. Boxplots in (E, F) indicate the median (center lines) and interquartile range (hinges). Whiskers extend from the hinges of each box to the most extreme values that are at most 1.5 times the interquartile range away from the hinges.