Table 7.
The proteins predicted by the proposed model to be associated with lncRNAs MALAT1 and XIST, respectively
| MALAT1 | XIST | ||||||
|---|---|---|---|---|---|---|---|
| SRPK1 | confirmed | CPSF1 | confirmed | Lamin B1 | confirmed | USP7 | confirmed |
| SF2 | confirmed | hnRNPA1 | confirmed | YY1 | confirmed | WTAP | confirmed |
| hnRNPC | confirmed | DNMT1 | confirmed | CIZ1 | confirmed | PCGF3 | confirmed |
| FUS | confirmed | YB-1 | confirmed | SAF-A | confirmed | PTBP1 | confirmed |
| LMNB1 | confirmed | SMAD2 | confirmed | FUS | confirmed | HNRNPU | unconfirmed |
| EZH2 | confirmed | PARP1 | confirmed | hnRNP K | confirmed | CBX2 | confirmed |
| HDAC9 | confirmed | ZC3H7B | unconfirmed | SMC1A | confirmed | YB-1 | unconfirmed |
| HuR | confirmed | ELAVL1 | confirmed | RBFOX2 | confirmed | EIF4A3 | confirmed |
| P53 | confirmed | HNRNPU | confirmed | SFPQ | confirmed | HDAC9 | unconfirmed |
| ILF3 | confirmed | PTBP1 | unconfirmed | PSPC1 | confirmed | CNOT1 | confirmed |