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. 2024 Apr 29;80(Pt 5):350–361. doi: 10.1107/S205979832400336X

Table 3. Crystallographic refinement statistics.

Values in parentheses are for the highest resolution shell.

Structure D07 E01 E05 B06 B04 H04 C11 C08
PDB code 8s47 8s46 8s45 8s49 8s4a 8s4c 8s48 8s4b
Resolution range (Å) 46.04–2.11 45.84–1.99 39.72–1.69 45.71–1.70 45.54–2.23 45.61–1.80 35.74–1.65 45.58–2.15
Reflections used, refinement 41687 (2736) 44268 (2726) 74809 (2708) 73647 (2829) 31404 (2885) 65236 (2875) 79766 (2847) 36122 (2755)
Reflections used for R free 2083 (139) 2219 (146) 3748 (137) 3698 (142) 1572 (142) 3278 (147) 3989 (145) 1801 (126)
R work 0.2059 (0.4197) 0.2247 (0.4747) 0.1964 (0.5552) 0.1974 (0.5124) 0.2008 (0.3377) 0.2015 (0.4860) 0.1908 (0.5033) 0.2400 (0.4334)
R free 0.2402 (0.5195) 0.2587 (0.4941) 0.2357 (0.6358) 0.2207 (0.4554) 0.2436 (0.3930) 0.2268 (0.5125) 0.2187 (0.5334) 0.2774 (0.4832)
No. of non-H atoms
 Total 2495 2418 2604 2532 2485 2576 2674 2415
 Macromolecules 2366 2344 2416 2383 2332 2414 2428 2326
 Ligands 38 13 17 14 33 11 19 12
 Solvent 91 61 171 135 120 151 227 77
Protein residues 308 305 310 308 304 314 311 302
R.m.s.d., bond lengths (Å) 0.002 0.002 0.010 0.009 0.003 0.004 0.008 0.002
R.m.s.d., angles (°) 0.42 0.49 0.93 0.97 0.54 0.70 0.83 0.42
Ramachandran favored (%) 98.68 99.34 99.35 98.68 97.67 99.35 98.37 96.64
Ramachandran allowed (%) 1.32 0.66 0.65 1.32 2.33 0.65 1.63 3.36
Ramachandran outliers (%) 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Rotamer outliers (%) 2.65 1.14 1.11 1.12 0.00 0.37 1.84 2.30
Clashscore 1.65 2.52 2.45 3.10 2.31 1.22 2.84 1.06
Average B factor (Å2)
 Overall 62.68 60.48 43.22 47.51 50.42 54.82 44.81 53.12
 Macromolecules 62.40 60.57 43.07 47.22 50.21 54.48 44.45 53.31
 Ligands 77.62 65.78 41.50 53.99 64.16 80.38 48.22 45.93
 Solvent 63.74 56.01 45.50 51.97 50.88 58.50 48.36 48.49