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. 2024 May 4;14:10297. doi: 10.1038/s41598-024-61025-2

Table 1.

The selected CTL epitopes for the final vaccine construction are provided by the NetCTL and IEDB servers.

Proteins/epitopes (position) Supertypes/HLA class I alleles Immunogenicity score Antigenicity/allergenicity Toxicity Epitope conservation (%) Homology to human proteins
Spike/WTAGAAAY (258–266) A1, A26, B58, B62/ HLA-A*68:23, HLA-B*15:17, HLA-C*03:03, HLA-A*26:02, HLA-A*29:02, HLA-A*32:15, HLA-B*40:13, HLA-C*12:03, HLA-A*30:02, HLA-B*15:02, HLA-A*26:01, HLA-A*32:07, HLA-B*35:01,HLA-B*27:20, HLA-A*68:01, HLA-C*14:02 0.1525 0.6306 (antigen)/non-allergen Non-toxin 100% Non-homolog
Spike/KVGGNYNYR (442–450) A3/ HLA-A*68:23, HLA-A*31:01, HLA-A*32:07, HLA-A*02:50, HLA-C*12:03, HLA-B*27:20, HLA-B*40:13, HLA-A*32:15, HLA-C*03:03 0.0277 1.5212 (antigen)/non-allergen Non-toxin 100 Non-homolog
Spike/RSYSFRPTY (490–498) A1, A3, B27, B58, B62/ HLA-B*15:17, HLA-B*15:03, HLA-A*32:07, HLA-C*12:03, HLA-C*03:03, HLA-A*68:23, HLA-B*27:20, HLA-B*40:13, HLA-A*30:02, HLA-A*32:01, HLA-B*58:01, HLA-A*30:01, HLA-B*15:01, HLA-A*02:17, HLA-C*07:02 0.0083 0.9553 (antigen)/non-allergen Non-toxin 100 Non-homolog
Nucleocapsid/KTFPPTEPK (361–369) A3/ HLA-A*11:01, HLA-A*68:23, HLA-A*30:01, HLA-B*27:20, HLA-C*12:03, HLA-B*40:13, HLA-A*32:07, HLA-C*14:02, HLA-A*03:01, HLA-A*31:01, HLA-A*68:01, HLA-C*03:03, HLA-A*32:01 0.1306 0.9553 (antigen)/non-allergen Non-toxin 100% Non-homolog
Membrane/ITVATSRTL (168–176) B62/ HLA-C*03:03, HLA-A*68:23, HLA-B*15:17, HLA-A*32:07, HLA-A*02:50, HLA-C*15:02, HLA-B*15:02, HLA-C*12:03, HLA-B*27:20, HLA-A*02:17, HLA-C*14:02, HLA-B*40:13, HLA-A*02:11 0.1306 0.7571 (antigen)/non-allergen Non-toxin 100% Non-homolog
Envelope/TLAILTALR (30–38) A3/ HLA-B*27:20, HLA-A*68:01, HLA-A*32:07, HLA-A*02:50, HLA-A*68:23, HLA-A*31:01, HLA-C*12:03, HLA-A*32:15, HLA-C*03:03, HLA-A*33:01, HLA-B*40:13 0.1989 0.7223 (antigen)/non-allergen Non-toxin 100% Non-homolog