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. 2024 Apr 24;20(4):e1011800. doi: 10.1371/journal.pcbi.1011800

Fig 13. Validation of model of the SNARE complex.

Fig 13

(A) Schematic diagram of the state variables of the SNARE complex model. It consists of a total of 36 states: 18 with a docked vesicle and 18 without a docked vesicle. The 2 separate vesicle states are not shown in the diagram. S and A represent the synchronous and asynchronous components of the complex, which can be in 6 and 3 different states respectively. (B-D) Results of independent simulations of the model with ODEs in BioNetGen (dashed lines) and in MCell4 (solid lines).