Table 3. CP data of housekeeping genes by BestKeeper.
| No. |
18s
|
CycA
|
36B4
|
GAPDH
|
HPRT
|
ActB
|
U6
|
|||||||
| Cn | SIDR | Cn | SIDR | Cn | SIDR | Cn | SIDR | Cn | SIDR | Cn | SIDR | Cn | SIDR | |
| Geometric mean (CP) | 16.65 | 16.63 | 29.98 | 30.25 | 27.45 | 27.50 | 31.04 | 31.36 | 26.41 | 26.30 | 16.83 | 17.42 | 25.15 | 25.82 |
| Arithmetic mean (CP) | 16.65 | 16.54 | 29.99 | 30.28 | 27.45 | 27.51 | 31.05 | 31.36 | 26.41 | 26.30 | 16.88 | 17.43 | 25.18 | 25.83 |
| Min (CP) | 15.80 | 16.00 | 29.30 | 28.50 | 27.10 | 26.40 | 29.30 | 30.40 | 26.00 | 24.60 | 15.50 | 16.80 | 23.40 | 24.80 |
| Max (CP) | 17.10 | 17.00 | 30.90 | 32.30 | 27.90 | 28.80 | 31.80 | 32.20 | 26.80 | 27.00 | 19.80 | 18.30 | 26.30 | 26.80 |
| SD (±CP) | 0.26 | 0.29 | 0.41 | 0.97 | 0.25 | 0.54 | 0.57 | 0.40 | 0.29 | 0.43 | 0.99 | 0.36 | 0.88 | 0.38 |
| CV (% CP) | 1.58 | 1.74 | 1.38 | 3.20 | 0.91 | 1.98 | 1.85 | 1.27 | 1.09 | 1.62 | 5.89 | 2.04 | 3.50 | 1.48 |
| Min (x-fold) | -1.80 | -1.45 | -1.61 | -3.37 | -1.27 | -2.15 | -3.34 | -1.94 | -1.33 | -1.62 | -2.51 | -1.54 | -3.37 | -2.03 |
| Max (x-fold) | 1.37 | 1.38 | 1.89 | 4.14 | 1.37 | 2.46 | 1.69 | 1.79 | 1.31 | 1.63 | 7.85 | 1.84 | 2.21 | 1.97 |
| SD (±x-fold) | 1.20 | 1.22 | 1.33 | 1.96 | 1.19 | 1.46 | 1.49 | 1.32 | 1.22 | 1.34 | 1.99 | 1.28 | 1.84 | 1.30 |
Descriptive statistics of seven candidate housekeeping genes based on their CP scores. n: Number of samples; CP: Crossing point; SD (±CP): Standard deviation of the CP; CV (%CP): Coefficient of variance expressed as a percentage on the CP level; Min (x-fold) and Max (x-fold): Extreme values of expression levels expressed as an absolute x-fold over- or under-regulation coefficient; SD (±x-fold): Standard deviation of the absolute regulation coefficients; Cn: Control; SIDR: Streptozotocin-induced diabetic rats; 18s: 18s ribosomal unit 5; CycA: Cyclophilin A; 36B4: Ribosomal protein large P0; GAPDH: Glyceraldehyde-3-phosphate dehydrogenase; HPRT: Hypoxanthine-guanine phosphoribosyl transferase; ActB: Beta-actin; U6: Terminal uridylyl transferase 1.
n=8