Skip to main content
. 2024 May 18;17(5):794–805. doi: 10.18240/ijo.2024.05.02

Table 3. CP data of housekeeping genes by BestKeeper.

No. 18s
CycA
36B4
GAPDH
HPRT
ActB
U6
Cn SIDR Cn SIDR Cn SIDR Cn SIDR Cn SIDR Cn SIDR Cn SIDR
Geometric mean (CP) 16.65 16.63 29.98 30.25 27.45 27.50 31.04 31.36 26.41 26.30 16.83 17.42 25.15 25.82
Arithmetic mean (CP) 16.65 16.54 29.99 30.28 27.45 27.51 31.05 31.36 26.41 26.30 16.88 17.43 25.18 25.83
Min (CP) 15.80 16.00 29.30 28.50 27.10 26.40 29.30 30.40 26.00 24.60 15.50 16.80 23.40 24.80
Max (CP) 17.10 17.00 30.90 32.30 27.90 28.80 31.80 32.20 26.80 27.00 19.80 18.30 26.30 26.80
SD (±CP) 0.26 0.29 0.41 0.97 0.25 0.54 0.57 0.40 0.29 0.43 0.99 0.36 0.88 0.38
CV (% CP) 1.58 1.74 1.38 3.20 0.91 1.98 1.85 1.27 1.09 1.62 5.89 2.04 3.50 1.48
Min (x-fold) -1.80 -1.45 -1.61 -3.37 -1.27 -2.15 -3.34 -1.94 -1.33 -1.62 -2.51 -1.54 -3.37 -2.03
Max (x-fold) 1.37 1.38 1.89 4.14 1.37 2.46 1.69 1.79 1.31 1.63 7.85 1.84 2.21 1.97
SD (±x-fold) 1.20 1.22 1.33 1.96 1.19 1.46 1.49 1.32 1.22 1.34 1.99 1.28 1.84 1.30

Descriptive statistics of seven candidate housekeeping genes based on their CP scores. n: Number of samples; CP: Crossing point; SD (±CP): Standard deviation of the CP; CV (%CP): Coefficient of variance expressed as a percentage on the CP level; Min (x-fold) and Max (x-fold): Extreme values of expression levels expressed as an absolute x-fold over- or under-regulation coefficient; SD (±x-fold): Standard deviation of the absolute regulation coefficients; Cn: Control; SIDR: Streptozotocin-induced diabetic rats; 18s: 18s ribosomal unit 5; CycA: Cyclophilin A; 36B4: Ribosomal protein large P0; GAPDH: Glyceraldehyde-3-phosphate dehydrogenase; HPRT: Hypoxanthine-guanine phosphoribosyl transferase; ActB: Beta-actin; U6: Terminal uridylyl transferase 1.

n=8