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. 2024 May 7;15:3840. doi: 10.1038/s41467-024-48041-6

Table 1.

Datasets from different species, tissues, and assay platforms were used to benchmark tauFisher’s ability to predict circadian time

Data Year GEO Species Tissue Platform Sampling Frequency Time Course Duration
Zhang R et al.56 2014 GSE54650 Mus musculus Kidney Affymetrix Mouse Gene 1.0 ST Array 2h 48h
Zhang R et al.56 2014 GSE54650 Mus musculus Liver Affymetrix Mouse Gene 1.0 ST Array 2h 48h
Zhang R et al.56 2014 GSE54650 Mus musculus Brainstem Affymetrix Mouse Gene 1.0 ST Array 2h 48h
Zhang R et al.56 2014 GSE54650 Mus musculus Cerebellum Affymetrix Mouse Gene 1.0 ST Array 2h 48h
Zhang R et al.56 2014 GSE54651 Mus musculus Kidney Illumina HiSeq 2000 6h 48h
Zhang R et al.56 2014 GSE54651 Mus musculus Liver Illumina HiSeq 2000 6h 48h
Zhang R et al.56 2014 GSE54651 Mus musculus Brainstem Illumina HiSeq 2000 6h 48h
Zhang R et al.56 2014 GSE54651 Mus musculus Cerebellum Illumina HiSeq 2000 6h 48h
Arnardottir ES et al.64 2014 GSE56931 Homo sapiens Blood Custom Affymetrix Microarray 4h 72h
Braun R et al.30 2018 GSE113883 Homo sapiens Blood Illumina NextSeq 500 2h 28h
Geyfman M et al.34 2012 GSE38622 Mus musculus Skin Affymetrix Mouse Gene 1.0 ST Array 4h 48h
Tognini P et al.36 2020 GSE157077 Mus musculus SCN Illumina HiSeq 4000 4h 24h