Table 2.
Distribution of flagella-associated pseudogenes in various S. Gallinarum and S. Pullorum strains
| Strain | Flagella-associated genes/pseudogenes | Accession No. | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| flgK | flhB | flhA | flgI | cheM | motB | fliN | fliL | ycgR | ||
| Hook associated protein | Export apparatus protein B | Export apparatus protein A | P-ring protein | Chemotaxis protein | Motor protein B | Motor switch protein | Basal Body protein | c-di-GMP binding protein | ||
|
S. Enteritidis str. P125109a |
■ | ■ | ■ | ■ | ■ | ■ | ■ | ■ | ■ | NC_011294 |
|
S. Gallinarum str. 287/91 |
□ | □ | □ | □ | □ | ■ | ■ | ■ | ■ | AM933173.1 |
|
S. Gallinarum str. 9184 |
□ | □ | □ | □ | □ | ■ | ■ | ■ | ■ | CP019035.1 |
|
S. Gallinarum str. 9 |
□ | □ | □ | □ | □ | ■ | ■ | ■ | ■ | CM001153.1 |
|
S. Pullorum str. S06004 |
□ | □ | □ | ■ | ■ | □ | □ | □ | □ | CP006575.1 |
|
S. Pullorum str. ATCC 9120 |
□ | □ | ■ | ■ | ■ | □ | ■ | ■ | ■ | NZ_CP012347.1 |
|
S. Pullorum S44987_1 |
□ | □ | ■ | ■ | ■ | ■ | ■ | ■ | ■ | LK931482.1 |
|
S. Pullorum str. CDC1983-67 |
□ | □ | ■ | ■ | ■ | ■ | ■ | ■ | ■ | NC_022221.1 |
|
S. Pullorum str. RKS5078 |
□ | □ | ■ | ■ | ■ | ■ | ■ | ■ | ■ | CP003047.1 |
The functions of each gene are listed under the gene name in the table, according to their annotation in the genomic database. “□” represents the gene was annotated as a pseudogene in the genomic database; “■” represents the gene was functional gene
a.S. Enteritidis P125109 serves as a reference strain