Table 2. Contribution of surface amplification.
A | B | C | D | E | ||||
---|---|---|---|---|---|---|---|---|
Cycle number | 1, 2 | 3–30 | 1, 2 | 3–30 | 1, 2 | 3–30 | 1–30 | 1–30 |
DNA template I8 | + | – | + | – | + | – | + | |
DNA template E1-2 | + | |||||||
DNA polymerase | + | – | + | + | + | + | + | + |
Amplified DNA coverage (fmol/mm2) | 0.0011 0.0002 | 0.0029 0.0002 | 0.0028 0.0003 | 0.0190 0.0002 | 0.0000 0.0001 |
Glass slides were prepared as described in Figure 4. Glass slides were submitted to two first solid phase PCR cycles (1, 2) with a 1 nM solution of template (I8) and Taq polymerase. Then 28 additional cycles (3–30) were run using the following procedures: A, without DNA template or DNA polymerase in solution; B, without DNA template but with DNA polymerase in solution; C, as B but with fresh PCR mix after each cycle; D, with DNA template (I8) and DNA polymerase in solution; E, as D but using control template (E1-2). The loading density of DNA molecules (fmol/mm2) amplified on the glass surface was determined by hybridisation with specific radioactively-labelled probe.