Table 5.
Relative abundance (%) of Genera associated with health status during disease manifestation (d21/DM).
| ASV | Phylum | Genus | RA-Diarrheic | RA-Healthy | Difference | q-value* |
|---|---|---|---|---|---|---|
| ASV1 | Actinomycetota (Actinobacteriota) | Bifidobacterium | 1.36 | 6.38 | −5.02 | 0.0002 |
| ASV3 | Pseudomonadota (Proteobacteria) | Escherichia-Shigella | 2.33 | 0.63 | 1.70 | 0.04 |
| ASV58 | Bacteroidota | Alloprevotella | 13.68 | 3.43 | 10.25 | 0.0002 |
| ASV6 | Actinomycetota (Actinobacteriota) | Collinsella | 2.53 | 4.47 | −1.94 | 0.03 |
| ASV8 | Bacillota (Firmicutes) | Peptostreptococcus | 2.37 | 0.16 | 2.21 | 0.02 |
| ASV9 | Bacteroidota | Prevotella | 7.08 | 2.94 | 4.15 | 0.04 |
| ASV16 | Bacteroidota | Prevotella_9 | 0.65 | 0.18 | 0.47 | 0.007 |
| ASV18 | Bacillota (Firmicutes) | Ligilactobacillus | 3.33 | 0.58 | 2.75 | 0.0009 |
| ASV22 | Bacillota (Firmicutes) | Phascolarctobacterium | 1.33 | 0.69 | 0.64 | 0.02 |
| ASV 25 | Bacteroidota | NA | 0.53 | 0.30 | 0.23 | 0.03 |
| ASV28 | Bacteroidota | Prevotella_7 | 0.32 | 6.32 | −6.00 | 0.0009 |
| ASV44 | Bacillota (Firmicutes) | Lachnospiraceae UCG-004 | 1.07 | 0.42 | 0.65 | 0.03 |
| ASV48 | Bacillota (Firmicutes) | Faecalicoccus | 0.23 | 0.96 | −0.73 | 0.001 |
| ASV 58 | Bacillota (Firmicutes) | NA | 0.24 | 0.88 | −0.64 | 0.001 |
| ASV 67 | Bacillota (Firmicutes) | Erysipelatoclostridium | 0.16 | 0.48 | −0.32 | 0.004 |
| ASV 75 | Thermodesulfobacteriota (Desulfobacterota) | Desulfovibrio | 0.11 | 0.39 | −0.29 | 0.03 |
| ASV78 | Verrucomicrobiota | Akkermansia | 0.10 | 0.25 | −0.15 | 0.04 |
| ASV82 | Bacillota (Firmicutes) | Flavonifractor | 0.09 | 0.45 | −0.36 | 0.0003 |
| ASV 91 | Bacillota (Firmicutes) | NA | 0.09 | 0.29 | −0.21 | 0.007 |
| ASV92 | Bacillota (Firmicutes) | Allisonella | 0.26 | 0.06 | 0.20 | 0.02 |
| ASV93 | Bacillota (Firmicutes) | Dialister | 0.07 | 0.41 | −0.34 | 0.02 |
| ASV109 | Bacillota (Firmicutes) | Lachnospiraceae FCS020 group | 0.08 | 0.14 | −0.07 | 0.03 |
| ASV112 | Bacillota (Firmicutes) | Intestinibacter | 0.05 | 0.21 | −0.16 | 0.007 |
| ASV132 | Bacteroidota | Butyricimonas | 0.04 | 0.2 | −0.16 | 0.02 |
RA relative abundance (%), difference (diarrheic % − healthy %) expressed as percentage points. *q-value, adjusted p-value determined using Benjamini–Hochberg procedure.