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. Author manuscript; available in PMC: 2024 Jun 17.
Published in final edited form as: Biochemistry. 2023 Sep 26;62(20):2908–2915. doi: 10.1021/acs.biochem.3c00291

Table 2.

Summary of the Large Subunit Stages at Which the Modification Enzymes Perform Their Functions in 23S rRNA

Ribosome Large Subunit Assembly Stages
Enzymea 23S rRNA Modificationb Earlyc Intermediate/
Latec
RluC Ψ 957,2508,2584 graphic file with name nihms-1989501-t0004.jpg
RluD Ψ 1919, 1921 graphic file with name nihms-1989501-t0005.jpg
RlmH m3Ψ 1919 graphic file with name nihms-1989501-t0006.jpg
RlhA OH5C 2505 graphic file with name nihms-1989501-t0007.jpg
RlmN m2A 2507 graphic file with name nihms-1989501-t0008.jpg
RluE Ψ 2461 graphic file with name nihms-1989501-t0009.jpg
RluF Ψ 2608 graphic file with name nihms-1989501-t0010.jpg
RluB Ψ 2609 graphic file with name nihms-1989501-t0011.jpg
a

Enzymes incorporating the modifications.

b

The modification and the 23S rRNA sequence position.

c

The 27S particle is an early-stage large subunit ribosomal assembly intermediate.25 The modifications present in the 27S intermediate at similar levels as in the wild-type 50S large subunit indicate that the enzymes incorporating the modifications perform their functions at the early stage of large subunit ribosome assembly. Alternatively, the modifications significantly missing from the 27S intermediate indicate that the enzymes incorporating these modifications perform their functions at the intermediate and/or late stages of large subunit ribosome assembly.