REAGENT or RESOURCE	SOURCE	IDENTIFIER Software and algorithms
Software and algorithms
sccomp	Mangiola et al.,19	https://github.com/stemangiola/sccomp/commit/1ceefdbbf6873f09af7811f6791b3f9e4aefb163
CuratedAtlasQuery		https://github.com/stemangiola/CuratedAtlasQueryR/commit/338c973250332cdbde80ee6ca56cc6c7951152d1
tidybulk	Mangiola et al.,20	https://github.com/stemangiola/tidybulk/commit/58d34393d0dd970f663d0ba31b0248c0fad50462
glmmSeq	Lewis et al.,12	https://github.com/myles-lewis/glmmSeq/commit/8a473e1565a975e34263151ad9265dc6f469dae8
brms	Burkner,13	https://github.com/paul-buerkner/brms/commit/701a6993f8a5e8b65799ee3b333e05d31a10219f
cellxgenedp		https://bioconductor.org/packages/release/bioc/html/cellxgenedp.html#:~:text=cellxgenedp_1.6.1.tar.gz
Azimuth	Hao et al.,92	https://github.com/satijalab/azimuth/commit/243ee5db80fcbffa3452c944254a325a3da2ef9e
SingleR	Aran et al.,16	https://bioconductor.org/packages/release/bioc/src/contrib/SingleR_2.4.1.tar.gz
celldex		https://bioconductor.org/packages/release/data/experiment/src/contrib/celldex_1.10.0.tar.gz
CellChat	Jin et al.,37	https://github.com/sqjin/CellChat/commit/e4f68625b074247d619c2e488d33970cc531e17c
singScore	Bhuva et al.,93	https://github.com/DavisLaboratory/singscore/commit/903177c62e42fff001fe4fdf0b34fc5d3bf924a5
edgeR	McCarthy et al.,94	https://bioconductor.org/packages/release/bioc/src/contrib/edgeR_4.0.1.tar.gz
Seurat	Butler et al.,95	https://github.com/satijalab/seurat/releases/tag/v5.0.1
tidySummarizedExperiment	Hutchison and Keyes et al.,96	https://github.com/stemangiola/tidySummarizedExperiment/commit/f249098b4bbf1a7e57c2e211555ee277421c5553
tidySingleCellExperiment	Hutchison and Keyes et al.,96	https://github.com/stemangiola/tidySingleCellExperiment/commit/514b7f1ce20e58b1ae08844d8793d86234c59a8b