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. 2024 Mar 25;25(5):2306–2322. doi: 10.1038/s44319-024-00122-9

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the data associated with this article, unless otherwise stated in a credit line to the data, but does not extend to the graphical or creative elements of illustrations, charts, or figures. This waiver removes legal barriers to the re-use and mining of research data. According to standard scholarly practice, it is recommended to provide appropriate citation and attribution whenever technically possible.

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(A) Comparison of expression, distance to nearest TE, and CG gene body methylation of hv and non-hvNLRs subset by cluster membership and N-term domain type. (B) Features mapped onto a phylogeny of NLRs in A. thaliana Col-0. NLRs without log₂(TPM) or %CG methylation data were determined to be unmappable (see “Methods”). Named NLRs with previous functional characterization are labeled. Data Information: (A) pairwise significance shown is the result of an unpaired Wilcoxon rank-sum test with Benjamini–Hochberg correction for multiple testing. Across subset significance shown is the result of a Kruskal–Wallis test with Benjamini–Hochberg correction for multiple testing. “ns” indicates a P value > 0.05; * indicates a P value <0.05 and ≥0.01; ** indicates a P value < 0.01 and ≥0.001; *** indicates a P value < 0.001. n refers to the number of NLR genes tested in each subset. Source data are available online for this figure.