KEY RESOURCES TABLE
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Bacterial and virus strains | ||
|
| ||
| AAVretro(SL1)_Syn_GCamp6f | Janelia, custom prep AAVrg (Chen et al.)98 | Addgene Cat# 100837 plasmid; RRID:Addgene_100837 |
| AAVretro_Syn_GCamp7f | (Dana et al.)99 | Addgene Cat#104488-AAVrg; RRID:Addgene_104488 |
|
| ||
| Chemicals, peptides, and recombinant proteins | ||
|
| ||
| NeuroTrace™ 640/660 Deep-Red Fluorescent Nissl Stain | ThermoFisher Scientific | Cat#N21483 |
| Rose Bengal | Sigma Aldrich | 330000; CAS: 632-69-9 |
| D-Sucrose | Fisher Scientific | BP220-1; CAS: 57-50-1 |
| Dental Cement, C&B Metabond Quick Adhesive | Parkell | N/A |
| Super glue, Loctite Superglue Gel | Loctiteproducts.com | N/A |
| Accelerant, Zip Kicker | Robart.com | N/A |
| Optical glue, Norland Optical Adhesive 63 | Norlandprod.com | N/A |
|
| ||
| Deposited data | ||
|
| ||
| Data used to produce figures, behavior data, and metadata | This paper | zenodo: https://doi.org/10.5281/zenodo.10685557 |
|
| ||
| Experimental models: Organisms/strains | ||
|
| ||
| C57BL/6J mice | The Jackson Laboratory | RRID:IMSR_JAX:000664 |
|
| ||
| Software and algorithms | ||
|
| ||
| Spatial Target Task code | This paper | zenodo: https://doi.org/10.5281/zenodo.10685557 |
| Analysis code | This paper | zenodo: https://doi.org/10.5281/zenodo.10685557 |
| Reinforcement learning model code | This paper | zenodo: https://doi.org/10.5281/zenodo.10685557 |
| BrainJ | (Botta et al.)70 | https://github.com/lahammond/BrainJ |
| Imaris 9 | Oxford Instruments | http://www.bitplane.com/imaris/imaris; RRID: SCR_007370 |
| Lightning Pose | (Biderman et al.)71 | https://github.com/danbider/lightning-pose |
| NeuroCAAS | (Abe et al.)100 | https://www.neurocaas.org/ |
| Grid.ai | https://www.grid.ai/ | N/A |
| Bonsai | https://open-ephys.org/bonsai | https://github.com/bonsai-rx/bonsai |
| MATLAB | Mathworks, Inc. | R2019b/R2020a |
| CircStat for MATLAB | (Berens et al.)101 | https://github.com/circstat/circstat-matlab |
| Python | Python.org | 3.7.8 |
| Scikit-learn | https://scikit-learn.org/stable/ | N/A |
| Datajoint | (Yatsenko et al.)102 | 0.13.0 |
| GraphPad Prism | www.graphpad.com | 9.5.1/10.1.0 |
|
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| Other | ||
|
| ||
| Cup for head-fixation 3D printing file | http://innovation.columbia.edu/technologies/CU21353 | zenodo: https://doi.org/10.5281/zenodo.10685557 |
| SCARA joystick 3D printing files and machining files | This paper | zenodo: https://doi.org/10.5281/zenodo.10685557 |
| DC-motors/encoders | Maxon Motors, Inc. | DC-MAX26S GB KL 24V, ENX16 EASY 1024IMP |
| TeenScience, Arduino Teensy 3.6 breakout board | https://github.com/Columbia-University-ZMBBI-AIC/Teenscience | zenodo: https://doi.org/10.5281/zenodo.10685557 |
| Teensy 3.6 | https://www.pjrc.com/store/teensy36.html | N/A |
| Solenoid | The Lee Company | LFVA1220310H |
| USB Camera, ELP USB Camera 1080p | Webcamerausb.com | N/A |
| Lens, Xenocam 3.6mm, 1/2.7″ lens | Amazon.com | N/A |