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. 2024 May 2;40(5):btae299. doi: 10.1093/bioinformatics/btae299

Figure 1.

Figure 1.

PlasCAT workflow. Upon sequencing plasmid DNA with Illumina short-read and/or Nanopore long-read technologies, raw (basecalled) data are uploaded to the cloud via a simple web interface. Sequencing read files are processed and used for de novo assembly. The final result is a FASTA file containing the plasmid sequence.