Table 1.
Comparison of combinations of Expansion Microscopy with different SRM methods.
Effective lateral resolutionb | Maximum Effective imaging depthc | Photodamage | Probe | |
---|---|---|---|---|
x4 expansiona +Epifluorescence/Confocal | ~70 nm | 15 μm | Medium | Conventional fluorophores |
x4 expansion + Light Sheet/Lattice Light Sheet | ~70 nm | 15 μm | Low | Conventional fluorophores |
x4 expansion + SIM | 25–40 nm | <4 μm | Medium | Conventional fluorophores |
x4 expansion + Airyscan | 30–40 nm | 15 μm | Medium | Conventional fluorophores |
x4 expansion + SOFI/SRRF | 15–30 nm | <2 μm higher when using light sheet | Medium | Fluctuating fluorophores |
x4 expansion + STED | ~10 nm | 15 μm | High | High-depletability fluorophores |
x4 expansion + PALM/STORM/SMLM | 5–10 nm | <2 μm higher when using light sheet | Medium | Photoactivatable fluorophores |
The x4 expansion refers to samples that have been expanded by a factor of 4.0. The effective resolution is calculated with a 4.0 length expansion factor (Equation (1)).
The maximum effective lateral resolution is calculated as the maximum lateral resolution of the microscope divided by the length expansion factor of the gel sample.
The maximum effective imaging depth is the maximum imaging depth of the microscope divided by the length expansion factor.