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. 2019 Oct 28;77(9):1661–1680. doi: 10.1007/s00018-019-03345-5

Table 2.

Overview of circRNAs identified by RNA sequencing and microarrays in GC

Sample Special treatment Detection method Number of circRNAs Number of circRNA differently expressed(≥ twofold change) Refs.
3 paired GC and GCN tissues RNase R CircRNA microarray About 2000 100(16 upregulated, 84 downregulated) [72]
8 paired GC and GCN tissues RNase R CircRNA microarray 4458 467(214 upregulated, 253 downregulated) [71]
3 paired GC and GCN tissues CircRNA microarray 5396 308(107 upregulated, 201 downregulated) [74]
3 paired III stage GC and GCN tissues CircRNA microarray 306(141 upregulated, 165 downregulated) [73]
3 paired GC and GCN tissues Ribosome-depleted RNA-seq About 3000 180(82 upregulated, 98 downregulated) [75]
3 groups of gastric tissues(gastric tissue without cancer, GC tissue, GCN tissue) Ribosome-depleted RNA-seq 736 [76]
5 paired GC and GCN tissues RNase R Microarray chip assay 62998 713(191 upregulated, 522 downregulated) [77]
3 paired plasma of patients and healthy persons CircRNA microarray 5396 343(171 upregulated, 172 downregulated) [78]
6 paired GC and GCN tissues CircRNA microarray 2070 400(176 upregulated, 264 downregulated) [79]