Table 2.
Conformational state | R (Å) | E | R 0 (Å) | Q D | n | J(λ) (nm4 M−1 cm−1) | κ 2 |
---|---|---|---|---|---|---|---|
Folded (0 M urea) | 21.3 (±1.6) | 0.72 (±0.02) | 24.9 (±1.4) | 0.050 (±0.008) | 1.332 (±0.001) | 1.96 × 1014 (±0.20 × 1014) | 0.87 (±0.2) |
Unfolded (6 M urea) | 30.8 (±1.7) | 0.29 (±0.01) | 26.5 (±1.4) | 0.070 (±0.004) | 1.384 (±0.002) | 3.09 × 1014 (±0.15 × 1014) | 0.67 (±0.2) |
Equilibrium partially folded (1 M urea) | 24.0 (±1.6) | 0.63 (±0.02) | 26.2 (±1.3) | 0.054 (±0.003) | 1.358 (±0.001) | 2.66 × 1014 (±0.13 × 1014) | 0.87 (±0.2) |
Amyloidogenic partially folded (0 M urea, pH 4.5) | 21.1 (±1.2) | 0.73 (±0.02) | 24.9 (±1.4) | 0.049 (±0.003) | 1.332 (±0.001) | 2.03 × 1014 (±0.10 × 1014) | 0.87 (±0.2) |
E values were determined experimentally from the fluorescence spectra of DACM-M-TTR and M-TTR, respectively. Q D was determined experimentally using free tryptophan as a reference. n was determined experimentally using a 2WAJ ABBE bench refractometer from Optika Microscopes (Bergamo, Italy). J(λ) was determined experimentally as the integral expressing the degree of spectral overlap between donor emission and acceptor absorption [44, 45]. κ 2 was assumed to be 0.87 ± 0.2 for folded proteins [46] and 2/3 (0.67 ± 0.2) for unfolded proteins [44]. R 0 values were determined using Eq. 3. R values were determined from E and R 0 values using Eq. 4