Target | PCR system | Primers and probes | Oligo sequence | Refs. |
---|---|---|---|---|
All bacteria | TaqMan | Forward | CGGTGAATACGTTCCCGG | 55,56 |
Reverse | TACGGCTACCTTGTTACGACTT | |||
Probe | 6 FAM-CTT GTA CAC ACC GCC CGT C-MGB | |||
B. intestinalis | SYBR Green | Forward | AGCATGACCTAGCAATAGGTTG | 57 |
Reverse | ACGCATCCCCATCGATTAT | |||
B. uniformis | SYBR Green | Forward | TCTTCCGCATGGTAGAACTATTA | 58 |
Reverse | ACCGTGTCTCAGTTCCAATGTG | |||
B. fragilis | SYBR Green | Forward | TGATTCCGCATGGTTTCATT | 57 |
Reverse | CGACCCATAGAGCCTTCATC |