Apoptosis-related genes |
Fas
|
TNF receptor superfamily member 6 |
Induction of apoptosis |
Up |
mRNA/protein |
EC, LH |
[40, 104] |
Noa
|
Protein |
LH |
[41, 105] |
Htra2
|
HtrA serine peptidase 2 |
Proteolysis |
Up |
mRNA/protein |
EC |
[103] |
Nos2
|
Nitric oxide synthase 2 |
Oxidation–reduction process |
Up |
Protein |
LH |
[45, 48, 51, 106] |
p21
|
Cyclin-dependent kinase inhibitor 1A |
DNA damage response |
Up |
mRNA/protein |
EC, IH |
[102, 107] |
p53
|
Transformation related protein 53 |
DNA damage response |
Up |
mRNA/protein |
EC, IH, LH |
[37, 102, 107] |
Acetylation |
Protein |
IH |
[107] |
Phlda1
|
Pleckstrin homology-like domain, family A, member 1 |
Induction of apoptosis, FasL biosynthetic process |
Up |
mRNA/protein |
EC, LH |
[104, 108] |
Bcl-2
|
B cell leukemia/lymphoma 2 |
Anti-apoptosis |
Up |
Protein |
LH |
[41, 44, 105] |
Phosphorylation |
Protein |
LH |
[45, 105] |
Nr2c1
|
Nuclear receptor subfamily 2, group C, member 1 |
Regulation of transcription |
Down |
mRNA |
EC |
[102] |
Noa
|
mRNA |
LH |
[37] |
Nr2c2
|
Nuclear receptor subfamily 2, group C, member 2 |
Regulation of transcription |
Down |
mRNA |
EC, LH |
[37, 102] |
Nr4a1
|
Nuclear receptor subfamily 4, group A, member 1 |
Regulation of transcription |
Down |
mRNA |
LH |
[37] |
Noa
|
mRNA |
EC |
[102] |
Bax
|
Bcl-2-associated X protein |
Apoptotic mitochondrial changes |
Translocation |
Protein |
LH |
[41, 43, 44, 105] |
Cyc
|
Cytochrome c
|
Apoptotic process, electron carrier activity |
Translocation |
Protein |
LH |
[41, 43, 45, 51, 105] |
Diablo
|
Direct inhibitor of apoptosis-binding protein with low pI |
Induction of apoptosis |
Translocation |
Protein |
LH |
[43, 47, 105] |
Erk
|
Mitogen-activated protein kinase 1/3 |
Stress-activated MAPK cascade |
Phosphorylation |
Protein |
LH |
[45, 105] |
p38
|
Mitogen-activated protein kinase 14 |
Stress-activated MAPK cascade |
Phosphorylation |
Protein |
LH |
[45, 51, 109] |
Rb
|
Retinoblastoma 1 |
Negative regulation of cell cycle |
Hypo-phosphorylation |
Protein |
EC |
[102] |
Casp2
|
Caspase 2 |
Induction of apoptosis |
Cleavage |
Protein |
LH |
[51] |
Casp3
|
Caspase 3 |
Induction of apoptosis |
Cleavage |
Protein |
LH |
[41, 43, 47, 51, 69] |
Casp9
|
Caspase 9 |
Induction of apoptosis |
Cleavage |
Protein |
LH |
[41, 43, 47, 51] |
Parp1
|
Poly (ADP-ribose) polymerase family, member 1 |
DNA repair |
Cleavage |
Protein |
LH |
[41, 47] |
Heat shock protein-related genes |
Hsp60 (Hspd1) |
Heat shock protein 1 (chaperonin) |
Response to unfolded protein |
Up |
mRNA/protein |
LH |
[117] |
Hsp70-1 (Hspa1b) |
Heat shock protein 1B |
Response to heat, anti-apoptosis |
Upb
|
mRNA/protein |
LH |
[34] |
Hsp70-3 (Hspa1a) |
Heat shock protein 1A |
Response to heat, DNA repair |
Up |
mRNA/protein |
IH, LH |
[34, 114, 115, 118] |
Hsp105 (Hsph1) |
Heat shock 105 kDa/110 kDa protein 1 |
Response to unfolded protein |
Upb
|
Protein |
IH |
[116] |
Translocation |
Protein |
EC |
[116] |
Downa
|
mRNA/protein |
LH |
[117] |
Hsp70-2 (Hspa2) |
Heat shock protein 2 |
Male meiosis, response to stress |
Down |
mRNA/protein |
EC, LH |
[27, 118, 178] |
Noa
|
mRNA/protein |
IH, LH |
[120, 179] |
Hsc70t (Hspa1 l) |
Heat shock protein 1-like |
Response to stress |
Down |
mRNA |
LH |
[118] |
Hsf1
|
Heat shock factor 1 |
Response to heat, regulation of transcription |
Down |
mRNA/protein |
EC |
[108] |
DNA binding activity |
Protein |
IH, LH, EC |
[115, 119, 120] |
Hsf2
|
Heat shock factor 2 |
Regulation of transcription |
Down |
mRNA/protein |
EC |
[108] |
Other genes |
Capn2
|
Calpain 2 |
Proteolysis |
Up |
mRNA |
LH |
[109] |
Ptgs2
|
Prostaglandin-endoperoxide synthase 2 |
Oxidation–reduction process |
Up |
mRNA/protein |
EC |
[125] |
Ucp2
|
Uncoupling protein 2 |
Response to superoxide |
Up |
Protein |
LH |
[124] |
Capn11
|
Calpain 11 |
Proteolysis |
Down |
mRNA |
LH |
[109] |
Ccnb1
|
Cyclin B1 |
Regulation of cell cycle |
Down |
Protein |
EC |
[127] |
Cdk1
|
Cyclin-dependent kinase 1 |
Regulation of cell cycle |
Down |
Protein |
EC, LH |
[127, 129] |
Cirp
|
Cold inducible RNA binding protein |
Stress response, translational regulation |
Down |
mRNA/protein |
IH, LH, EC |
[59, 180] |
Csda
|
Cold shock domain protein A |
Regulation of transcription |
Down |
mRNA/protein |
IH, LH, EC |
[181] |
Lig3
|
DNA ligase III |
DNA repair |
Down |
Protein |
EC |
[128] |
Mta1
|
Metastasis associated 1 |
Regulation of transcription |
Down |
mRNA/protein |
IH, LH, EC |
[107, 182] |
Pde4a
|
Phosphodiesterase 4A, cAMP specific |
Metabolic process |
Down |
Protein |
EC |
[183] |
Polb
|
DNA polymerase beta |
DNA repair |
Down |
mRNA |
EC |
[126] |
Prm2
|
Protamine 2 |
Chromosome condensation |
Down |
mRNA |
EC, LH |
[181] |
Eif2s1
|
Eukaryotic translation initiation factor 2, subunit 1 alpha |
Regulation of translation |
Phosphorylation |
Protein |
LH |
[54] |