Table 1.
arf1 Allele | Amino acid substitutions | DNA sequence changesa | Diagnostic restriction sites |
---|---|---|---|
101 | G2A | GGT | Gain HaeIII |
GCC | |||
102 | K7A | AAG | Lose DdeI |
GCA | |||
103 | K16, E17, R19 | AAAGAAATGCGT | Gain BbvI |
GCAGCAATGGCT | |||
104 | D26 | GAT | Gain HpaII |
GCC | |||
105 | K30 | AAG | Gain BanI |
GCC | |||
106 | K36, K38, K41 | AAGTTGAAATTGGGTGAA | Gain BsgI |
GCCTTGGCATTGGGTGCA | |||
107 | E54 | GAA | Noneb |
GCC | |||
108 | K59 | AAG | Noneb |
GCA | |||
109 | D67 | GAT | Gain HaeIII |
GCC | |||
110 | D72, R73, R75 | GACAGAATTAGA | Lose BglII |
GCCGCAATTGCA | |||
111 | R79, H80 | AGACAC | Lose BsmA1 |
GCAGCC | |||
112 | R83, E86 | AGAAACACTGAA | Gain PstI |
GCAAACACTGCA | |||
113 | D93, D96, R97 | GATTCTAACGATAGA | Gain SfaNI |
GCTTCTAACGCTGCA | |||
114 | R99 | CGT | Lose BstUI |
GCT | |||
115 | E102, R104, E105 | GAAGCTAGAGAA | Gain Pst1 |
GCTGCTGCAGCA | |||
116 | R109 | AGA | Gain NlaIII |
GCT | |||
117 | E113, D114, E115 | GAAGATGAATTGAGA | Gain PvuII |
R117 | GCAGCTGCATTGGCA | ||
118 | K127, D129, E132 | AAGCAAGATTTGCCAGAA | Gain HindIII |
GCTCAAGCTTTGCCAGCA | |||
119 | E138, E141, K142 | GAAATCACTGAAAAA | Gain PstI |
GCAATCACTGCAGCA | |||
120 | H146, R149, R151 | CATTCTATTAGAAACCGT | Gain SfaNI |
GCATCTATTGCAAACGCT | |||
121 | E164 | GAA | Gain BspMI |
GCA | |||
122 | E168, E171 | GAAGGTTTGGAA | Gain Bgl I |
GCCGGTTTGGCA | |||
123 | K178 | AAA | Gain HaeIII |
GCC |
Mutant sequence is below the corresponding wild-type sequence. Altered codons are in bold; altered nucleotides are underlined.
No restriction site changes were introduced by the mutation. TaqMan (see MATERIALS AND METHODS) was used to identify mutants.