Table 1.
Complex | Members | Function | Interactions | Cancer | References |
---|---|---|---|---|---|
NCoR/SMRT | NCoR/SMRT, HDAC1,3,7, TBL1, GP52 TAK1, CORO2A | Histone deacetylase | Nuclear receptors, AP-1, NF-κB, ETO, MYOD, MAD/MXI, CBF, TFIIB | Prostate, breast, bladder, colorectal, endometrial, astrocytoma, leukemia | [5, 11, 13] |
CoREST | CoREST, HDAC1/2, BHC80, BRAF35, LSD1 | Histone deacetylase, histone demethylase | REST, ZNF217, SWI/SNF, CTBP | Prostate, breast, colorectal | [11, 27, 32] |
CTBP | CTBP, HDAC1/2, LSD1, Polycomb group proteins, NADH dehydrogenase | Histone deacetylase, histone demethylase | INK4a, INK4b, E-cadherin, PTEN, PERP, BAX, p21, Noxa, CoREST | Colorectal, breast, hepatocellular | [11, 33, 34] |
SIN3A,B | SIN3A,B, HDAC1/2, BRMS1, RbAp4, RbAp7, SAP18, SAP30, ING1/2, SD53 | Histone deacetylase |
SIN3A: SMRT, MeCP2 SIN3B: CIITA, E2F-Rb Both: Mad1, KLF repressors, REST, ESET |
Breast, NSCLC | [37, 38, 41] |
SWI/SNF | BRM, BRG1, BAF47, BAF155, BAF170, BAF250A (ARID1A), BAF250B (ARID1B), BAF180, BAF200, BRD7 | ATP-dependent chromatin remodeling, histone deacetylase recruitment | AP-1, steroid receptors, CoREST, MYC, p53, Rb, OCT4, SOX2, INK4a, EZH2, RHOA, ROCK1, Hedgehog, IFNB, CDKN1A (p21), SMAD3 | Breast, colorectal, pancreatic, melanoma, bladder, renal, lung, ovarian clear cell and endometrioid, uterine endometrioid | [11, 43, 45–47] |
NURD |
CHD3, CHD4, HDAC1, HDAC2, LSD1, MBD2, MDB3, MTA1, MTA2, MTA3, RBBP4, RBBP7, GATAD2A, GATAD2B |
ATP-dependent chromatin remodeling, histone deacetylase, histone demethylase | ER, TWIST, SNAIL, BCL, JUN, PML–RAR, INK4, Rb, BRCA, MYC, HER2, HIF1, p53, PAX | Breast, colorectal, gastric, esophageal, endometrial, pancreatic, ovarian, lung, leukemia, lymphoma | [49–52] |
PRAME | Unknown | Recruitment of EZH2 | RAR in the presence of RA | Melanoma, leukemia, multiple myeloma, lymphoma, head and neck, breast | [9] |
PRC | PRC1: RING1a, RING1, CBX2, CBX4, CBX7, CBX8, BMI1, MEL18, BLR, NSPC1, PHC1, PHC2, PHC3 PRC2: EZH2, EZH1, EED, RBBP4, BBP7, PCL1, PCL2, PCL3, JARID2 |
PRC1: histone monoubiquitylation PRC2: histone methylation |
RNA Pol II, DNA methyltransferases, PML–RAR, PZLF–RAR, ARF, INK4b, INK4a, Hedgehog, Wnt, Notch |
Bladder, breast, prostate, squamous cell carcinomas, leukemia, neuroblastoma, colorectal | [56] |