Table 1.
Region | Pop.a | Sb | θ w (×10−4) | π (×10−4) | Tajima’s D | Fu & Li’s D* | Fu & Li’s F* | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Rankc | Rankc | Rankc | p d | Rankc | P d | Rankc | p d | ||||||||
SNAP25 rs363039 | YRI | 28 | 19.28 | 0.98 | 30.70 | >0.99 | 2.03 | >0.99 | >0.001 | 0.72 | 0.90 | 0.076 | 1.8 | 0.99 | 0.0072 |
CEU | 24 | 16.53 | 0.98 | 12.37 | 0.90 | −0.85 | 0.24 | 0.82 | 1.42 | 0.96 | 0.022 | 0.78 | 0.75 | 0.20 | |
EAS | 23 | 15.84 | 0.99 | 17.69 | 0.97 | 0.39 | 0.63 | 0.39 | 1.71 | >0.99 | >0.001 | 1.50 | 0.96 | 0.049 | |
SNAP25 rs363016 (2059 bp) | CEU | 3 | 3.43 | 0.21 | 4.89 | 0.43 | 0.93 | 0.79 | n.d. | 0.92 | 0.85 | n.d. | 1.07 | 0.83 | n.d. |
SNAP25 rs363043 (1771 bp) | CEU | 3 | 3.98 | 0.28 | 5.71 | 0.53 | 0.95 | 0.80 | n.d. | −0.35 | 0.46 | n.d. | 0.039 | 0.56 | n.d. |
aPopulation
bNumber of segregating sites
cPercentile rank relative to the distribution of values obtained in reference windows
d p value calculated through the use of coalescent simulations