Table 2.
Required and facultative data for MiFlowCyt compliant cytometric publications
Data set | MiFlowCyt mandatory data | Further information, facultative |
---|---|---|
Sample/Specimen | Type, source, source treatment, phenotype, genotype, location | circumstances of sampling |
Sample Treatment | Sampling, storage, preprocessing (chemical or mechanical), staining | Storage/transport temperature and humidity |
Reagents | Chemicals, analytes, Antibody clones, names/numbers, manufacturer, catalogue numbers | Concentration, purity |
Controls | Quality Control Measures, FMOs, Positive/negative control | For heterogeneous biocenosis individual species, if available. |
Instrument | Manufacturer, model, configuration, settings, detector voltages, optical filters | If instrument is modified details on modification and performance. |
Original data | Positive, negative controls, single species controls, instrument calibration measurements. Data reposition in flow repository. | Gating strategy, if applicable |
Instrument | Manufacturer, model, configuration, settings, detector voltages, optical filters | If instrument is modified details on modification and performance. |
Data Analysis | List-mode data file, compensation, gating, FlowRepository data access code | Software used for further analysis |