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. 2024 Apr 25;13(5):391. doi: 10.3390/antibiotics13050391

Table 1.

Research topic, species of interest, AMR genes, and relevant findings observed in key studies used in this review.

Topic References Species AMR Genes Findings
Global trends and epidemiology [14] E. coli, K. pneumoniae - Rapid increase in incidence rates of AMR among clinically important pathogens.
Prevalence and impact of E. coli infections [19] E. coli ESBLs Increasing detection rates of ESBLs among E. coli causing infections in humans.
K. pneumoniae epidemiology [31,34,35] K. pneumoniae Carbapenemases, ESBLs Widespread resistance to aminoglycosides, carbapenems, quinolones, and polymyxins.
Phylogenetic background and strain adaptation [11,15] E. coli - Clonal adaptation and increasing prevalence, especially of E. coli ST131, in humans.
Transmission of AMR via direct/indirect contact [37,50,51,52,53] E. coli, K. pneumoniae ESBL, KPC-2 Increased risk of transmission among dairy farm workers; indirect transmission through food and environment; low evidence of direct transmission.
Pasteurization and raw milk consumption [32,52,55,56] E. coli, Enterobacterales ESBL Significant variation in raw milk consumption worldwide; association between raw milk and bacterial spread from cows to humans.
MGEs and AMR spread [24,58,59] E. coli - Emphasis on the role of MGEs in the spread of AMR; inconsistent strain distribution in bovine milk vs. human clinical strains.
Specific MGEs in mastitis [39,60,61,62,63,64,65,66,67,68] E. coli, Enterobacterales blaCTX-M, blaCMY-2, blaOXA-181 ISEcp1 linked to blaCTX-M genes and their dissemination; chromosomal and plasmid locations noted.
Plasmids and AMR genes [39,76,77,78,79,80,81,82] E. coli, K. pneumoniae blaCTX-M, blaTEM, blaSHV, blaCMY High mobility of IncI1, IncN, and IncF plasmids among isolates; widespread dissemination of ESBL genes like blaCTX-M-15.
Integrons and gene cassettes [60,71,72,73,74,75] E. coli, K. pneumoniae Various High prevalence of class 1 integrons among isolates; need for full genetic context in epidemiological studies.
Surveillance and monitoring [85,88,89] E. coli, Klebsiella spp., other Enterobacteriaceae ESBL/AmpC Increasing resistance in E. coli isolates from cattle; presence of ESBL/AmpC producers.
Antimicrobial stewardship in mastitis [90,91,92,95,98,99,100,105] E. coli, Klebsiella spp. - Antimicrobial therapy for mastitis control is not always necessary: spontaneous cure or presence of non-susceptible pathogens. Varied pathogen responses influence treatment choices. Most mild and moderate CM caused by E. coli does not require antimicrobial treatment.
Environmental stewardship [108,112,115,116] E. coli, other Enterobacteriaceae - Presence of antimicrobial residue and multidrug-resistant E. coli in waste milk fed to calves and flushing wastewater dairy pond effluent as a potential disseminator AMR bacterium when used as soil fertilizer.