Table 1.
Performance of different scoring methods on CAPRI decoys
| Success rates | ||||
|---|---|---|---|---|
| Method | AUROC | Top1 | Top5 | Top100 |
| ZEPPI | 0.72 ± 0.13 | 2/13 | 2/13 | 12/13 |
| HADDOCK | 0.57 ± 0.23 | 2/13 | 3/13 | 9/13 |
| iScore | 0.68 ± 0.21 | 5/13 | 6/13 | 9/13 |
| DeepRank | 0.64 ± 0.19 | 1/13 | 1/13 | 9/13 |
| DOVE | 0.56 ± 0.14 | 1/13 | 2/13 | 10/13 |
| GNN-DOVE | 0.63 ± 0.16 | 1/13 | 6/13 | 8/13 |
| DeepRank-GNN | 0.72 ± 0.19 | 1/13 | 5/13 | 10/13 |
The AUROC in this table is averaged over values for each of 13 targets. Success Rates of Top N indicates the number of targets where there are acceptable or better predictions in the Top N predictions.