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. 2024 May 25;25(4):bbae250. doi: 10.1093/bib/bbae250

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© The Author(s) 2024. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Algorithm performance in ST data of the cerebellum region. (A) Spatial distribution of the cell types predicted by the nine algorithms. Astro (astrocyte), VLMC (vascular leptomeningeal cells), Oligo (oligodendrocyte). (B) ASS score of the nine algorithms. Colors represented different chips and the shades of color represented different resolutions. (C) Spot-level correlation of the algorithms on simulated data. The number of genes was set at 2500. (D) Proportion of cell types in the reference data (snRNA-seq) and the proportion of cells predicted by each algorithm.