Mean |
The mean value of the correlations within the gene set |
Meanabs |
The mean value of the absolute correlations within the gene set |
Meansqr |
The mean value of the squared correlations within the gene set |
Maxmean |
Either the mean value of positive correlations or the mean value of negative correlations within the gene set, depending on which is greater. |
Median |
The median value of the correlations within the gene set |
Sig Number |
The number of significant (FDR-corrected) correlations within the gene sets. |
Kolmogorov-Smirnov (KS) |
Compute the cumulative sum for the ranked correlations between all genes and brain profiles. For each gene, increment the cumulative sum if it belongs to the gene set and decrement it otherwise. Each gene has equal weight in either the increment or the decrement, with a value of 1. The KS is calculated as the maximum deviation from zero of the cumulative sums. |
Weighted KS |
Same as above except that the increment or decrement is weighted by the correlation strength of the gene. |