Antibodies |
|
Anti-phospho-AKT-S473 |
Cell Signaling Technology |
Cat#4051; RRID:AB_331158
|
Anti-AKT |
Cell Signaling Technology |
Cat#4685; RRID:AB_2225340
|
Anti-phospho-AKT-T308 |
Cell Signaling Technology |
Cat#4056; RRID:AB_331163
|
Anti-p110α |
Cell Signaling Technology |
Cat#4249; RRID:AB_2165248
|
Anti-p110β |
Cell Signaling Technology |
Cat#3011; RRID:AB_2165246
|
Anti-β-actin |
Millipore-Sigma |
Cat#A3854; RRID:AB_262011
|
|
Chemicals, peptides, and recombinant proteins |
|
Human FGF-basic (FGF-2/bFGF) (154 aa) Animal-Free Recombinant Protein PeproTech® |
Thermo Fisher Scientific |
Cat#AF-100-18B-1MG |
Human EGF, Animal-Free Recombinant Protein, PeproTech® |
Thermo Fisher Scientific |
Cat#AF-100-15-1MG |
AZD6482 |
AdooQ Bioscience |
Cat#A10112 |
BKM120 |
AdooQ Bioscience |
Cat#A11016 |
CAL101 |
AdooQ Bioscience |
Cat#A10172 |
CZC24832 |
AdooQ Bioscience |
Cat#A11363 |
TGX-221 |
AdooQ Bioscience |
Cat#A10923 |
BYL719 |
AdooQ Bioscience |
Cat#A11328 |
Temozolomide |
AbMole BioScience |
Cat#M2129 |
Dimethyl sulfoxide |
Millipore Sigma |
Cat#41639 |
Puromycin dihydrochloride from Streptomyces alboniger |
Millipore Sigma |
Cat#P8833 |
Blasticidin S HCl |
Thermo Fisher Scientific |
Cat#A1113903 |
|
Critical commercial assays |
|
Effectene Transfection Reagent |
QIAGEN |
Cat#301425 |
CellTiter 96® AQueous One Solution Cell Proliferation Assay (MTS) |
Promega |
Cat#G3582 |
SuperSignal™ West Pico PLUS Chemiluminescent Substrate |
Thermo Fisher Scientific |
Cat#34580 |
SuperSignal™ West Femto Maximum Sensitivity Substrate |
Thermo Fisher Scientific |
Cat#34096 |
High Concentration Corning Matrigel Matrix |
Corning |
Cat#354248 |
|
Experimental models: Cell lines |
|
U87MG |
ATCC |
Cat#HTB-14; RRID:CVCL_XZ66 |
SF295 |
Millipore Sigma |
Cat#SCC289; RRID:CVCL_1690 |
LN229 |
ATCC |
Cat#CRL-2611; RRID:CVCL_0393 |
A172 |
ATCC |
Cat#CRL-1620; RRID:CVCL_0131 |
NHA human astrocytes |
Lonza |
Cat#cc-2565 |
HEK293T |
ATCC |
Cat#CRL-3216; RRID:CVCL_0063 |
|
Experimental models: Organisms/strains |
|
Scid/Beige (C.B-Igh-1b/GbmsTac-Prkdcscid-Lystbg N7) |
Taconic Biosciences |
Cat#CBSCBG-F; RRID:IMSR_TAC:CBSCBG |
|
Software, algorithms, and public datasets |
|
The Cancer Dependency Map |
https://depmap.org |
22Q1; Protein_Array; Proteomics; drug_sensitivity |
The Cancer Gene Atlas |
https://www.cbioportal.org |
gbm_tcga |
The China Glioma Gene Atlas |
http://www.cgga.org.cn/download.jsp |
mRNAseq_693 |
The Genotype-Tissue Expression |
https://gtexportal.org |
gene_tpm_brain_cortex |
The Human Protein Atlas |
https://www.proteinatlas.org |
Glioma |
|
Plasmids |
|
pBABE-Myr-AKT1 |
Addgene |
Cat#15266 |
pBABE-Myr-AKT2 |
Addgene |
Cat#9018 |
pBABE-Myr-AKT3 |
Addgene |
Cat#9019 |
PIK3CA gRNA |
Addgene |
Cat#77415 |
PIK3CB gRNA |
Addgene |
Cat#76191 |
PIK3CB gRNA |
Addgene |
Cat#76192 |
pLenti-Cas9-Blast |
Addgene |
Cat#52962 |
psPAX2 |
Addgene |
Cat#12260 |
pMD2.G |
Addgene |
Cat#12259 |
PIK3CA shRNA RHS4844-101656239 |
Horizon Discovery |
Cat#RHS4012 |
PIK3CB shRNA RHS4884-10165656350 |
Horizon Discovery |
Cat#RHS4012 |
PIK3CD shRNA RHS4884-101655755 |
Horizon Discovery |
Cat#RHS4012 |
|
Other |
|
Dulbecco’s Modified Eagle Medium |
Thermo Fisher Scientific |
Cat#12100061 |
EqualFETALTM bovine serum |
Atlas Biologicals |
Cat#EF-0500-A |
Streptomycin & penicillin, Gibco® |
Thermo Fisher Scientific |
Cat#15140163 |
Trypsin-EDTA |
Santa Cruz Biotechnology |
Cat#sc-363354 |
AGM™ Astrocyte Growth Medium |
Lonza |
Cat#cc-3138 |
Fetal Bovine Serum |
Atlas Biologicals |
Cat#F-0500-A |
MEM Non-Essential Amino Acids Solution |
Thermo Fisher Scientific |
Cat#11140050 |
B-27™ Supplement, Gibco® |
Thermo Fisher Scientific |
Cat#17504001 |
TrypLE™ Express Enzyme |
Thermo Fisher Scientific |
Cat#12605010 |