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. 2024 May 7;27(6):109921. doi: 10.1016/j.isci.2024.109921
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Anti-phospho-AKT-S473 Cell Signaling Technology Cat#4051; RRID:AB_331158
Anti-AKT Cell Signaling Technology Cat#4685; RRID:AB_2225340
Anti-phospho-AKT-T308 Cell Signaling Technology Cat#4056; RRID:AB_331163
Anti-p110α Cell Signaling Technology Cat#4249; RRID:AB_2165248
Anti-p110β Cell Signaling Technology Cat#3011; RRID:AB_2165246
Anti-β-actin Millipore-Sigma Cat#A3854; RRID:AB_262011

Chemicals, peptides, and recombinant proteins

Human FGF-basic (FGF-2/bFGF) (154 aa) Animal-Free Recombinant Protein PeproTech® Thermo Fisher Scientific Cat#AF-100-18B-1MG
Human EGF, Animal-Free Recombinant Protein, PeproTech® Thermo Fisher Scientific Cat#AF-100-15-1MG
AZD6482 AdooQ Bioscience Cat#A10112
BKM120 AdooQ Bioscience Cat#A11016
CAL101 AdooQ Bioscience Cat#A10172
CZC24832 AdooQ Bioscience Cat#A11363
TGX-221 AdooQ Bioscience Cat#A10923
BYL719 AdooQ Bioscience Cat#A11328
Temozolomide AbMole BioScience Cat#M2129
Dimethyl sulfoxide Millipore Sigma Cat#41639
Puromycin dihydrochloride from Streptomyces alboniger Millipore Sigma Cat#P8833
Blasticidin S HCl Thermo Fisher Scientific Cat#A1113903

Critical commercial assays

Effectene Transfection Reagent QIAGEN Cat#301425
CellTiter 96® AQueous One Solution Cell Proliferation Assay (MTS) Promega Cat#G3582
SuperSignal™ West Pico PLUS Chemiluminescent Substrate Thermo Fisher Scientific Cat#34580
SuperSignal™ West Femto Maximum Sensitivity Substrate Thermo Fisher Scientific Cat#34096
High Concentration Corning Matrigel Matrix Corning Cat#354248

Experimental models: Cell lines

U87MG ATCC Cat#HTB-14; RRID:CVCL_XZ66
SF295 Millipore Sigma Cat#SCC289; RRID:CVCL_1690
LN229 ATCC Cat#CRL-2611; RRID:CVCL_0393
A172 ATCC Cat#CRL-1620; RRID:CVCL_0131
NHA human astrocytes Lonza Cat#cc-2565
HEK293T ATCC Cat#CRL-3216; RRID:CVCL_0063

Experimental models: Organisms/strains

Scid/Beige (C.B-Igh-1b/GbmsTac-Prkdcscid-Lystbg N7) Taconic Biosciences Cat#CBSCBG-F; RRID:IMSR_TAC:CBSCBG

Software, algorithms, and public datasets

The Cancer Dependency Map https://depmap.org 22Q1; Protein_Array; Proteomics; drug_sensitivity
The Cancer Gene Atlas https://www.cbioportal.org gbm_tcga
The China Glioma Gene Atlas http://www.cgga.org.cn/download.jsp mRNAseq_693
The Genotype-Tissue Expression https://gtexportal.org gene_tpm_brain_cortex
The Human Protein Atlas https://www.proteinatlas.org Glioma

Plasmids

pBABE-Myr-AKT1 Addgene Cat#15266
pBABE-Myr-AKT2 Addgene Cat#9018
pBABE-Myr-AKT3 Addgene Cat#9019
PIK3CA gRNA Addgene Cat#77415
PIK3CB gRNA Addgene Cat#76191
PIK3CB gRNA Addgene Cat#76192
pLenti-Cas9-Blast Addgene Cat#52962
psPAX2 Addgene Cat#12260
pMD2.G Addgene Cat#12259
PIK3CA shRNA RHS4844-101656239 Horizon Discovery Cat#RHS4012
PIK3CB shRNA RHS4884-10165656350 Horizon Discovery Cat#RHS4012
PIK3CD shRNA RHS4884-101655755 Horizon Discovery Cat#RHS4012

Other

Dulbecco’s Modified Eagle Medium Thermo Fisher Scientific Cat#12100061
EqualFETALTM bovine serum Atlas Biologicals Cat#EF-0500-A
Streptomycin & penicillin, Gibco® Thermo Fisher Scientific Cat#15140163
Trypsin-EDTA Santa Cruz Biotechnology Cat#sc-363354
AGM™ Astrocyte Growth Medium Lonza Cat#cc-3138
Fetal Bovine Serum Atlas Biologicals Cat#F-0500-A
MEM Non-Essential Amino Acids Solution Thermo Fisher Scientific Cat#11140050
B-27™ Supplement, Gibco® Thermo Fisher Scientific Cat#17504001
TrypLE™ Express Enzyme Thermo Fisher Scientific Cat#12605010