Table 2.
Summary of the main properties of oyster satellitomes
Species | Number of satellite DNAs | Monomer length range (bp) | Genome proportion (%) | Satellitome proportion (%) | Number of satDNA showing similarity to TE | Repbase similarities for satDNAs | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
Range | Total | Range | DNA/Helitron | other DNA transposons | Retrotransposons | Multiple TEs | Other | ||||
C. angulata | 62 | 28–8637 | 0.01–0.72 | 7.70 | 0.13–9.32 | 39 | 15 | 13 | 4 | 5 | 4 |
C. virginica | 33 | 39–2748 | 0.01–0.58 | 2.92 | 0.30–19.78 | 15 | 5 | 6 | 0 | 4 | 1 |
C.hongkongensis | 56 | 34–2421 | 0.01–0.98 | 7.14 | 0.14–13.65 | 22 | 14 | 7 | 0 | 1 | 1 |
C. ariakensis | 51 | 42–2823 | 0.01–1.15 | 8.21 | 0.12–14.01 | 29 | 14 | 12 | 2 | 1 | 3 |
O. edulis | 52 | 23–16,346 | 0.01–1.30 | 6.70 | 0.18–19.48 | 18 | 11 | 4 | 1 | 2 | 0 |
C. gigas* | 52 | 21–3287 | 0.01–0.72 | 6.33 | 0.16–11.29 | 38 | 16 | 16 | 6 | 0 | 2 |
*Data from Tunjić-Cvitanić et al. (2021), added for comparison