Table 1. Crystallisation and structure solution of CNPase-nanobody complexes.
Nanobody | 5E | 7E | 8C | 8D | 10E |
---|---|---|---|---|---|
Temperature (°C) | 20 | 8 | 8 | 8 | 20 |
Well solution | 0.2 M Na/K phosphate pH 7.0, 25% PEG3350 | 0.1 M MIB pH 4.0, 25% PEG3350 | 0.1 M MIB pH 8.0, 25% PEG1500 | 0.1 M phosphate-citrate pH 4.2, 18% PEG8000, 0.35 M NaCl | 0.2 M Na malonate, 20% PEG3350 |
Protein concentration (mg/ml) | 8.9 | 7.5 | 7.4 | 8.5 | 11.2 |
Cryoprotectant | 25% PEG400 | - | 25% PEG400 | 30% glycerol | 25% PEG400 |
Nanobody model PDB entry | 6GWN chain C [46] | 6H7J chain C [47] | 6QV2 chain E [48] | AlphaFold2 [49] model of NbCNP-8D | 7KN7 chain B [50] |
Copies of complex in ASU | 1 | 4 | 1 | 2 | 4 |