Table 4.
Comparison of antimicrobial resistance genes and plasmid replicon types from K. pneumoniae of human and dog origin.
Human isolates and their plasmids | Dog isolates and their plasmids | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KPH1 | KPH3 | KPH4 | KPA1 | KPA2 | KPA3 | |||||||||||
pKPH1_1 (132,031 bp) |
pKPH1_2 (125,297 bp) |
pKPH3_1 (108,736 bp) |
pKPH3_2 (41,190 bp) |
pKPH4_1 (77,911 bp) |
pKPH4_2 (42,965 bp) |
pKPH4_3 (6,141 bp) |
pKPA1_1 (111,444 bp) |
pKPA1_2 (68,908 bp) |
pKPA1_3 (6,141 bp) |
pKPA2_1 (188,688 bp) |
pKPA2_2 (160,519 bp) |
pKPA2_3 (82,102 bp) |
pKPA2_4 (6,141 bp) |
pKPA3_1 (175,819 bp) |
pKPA3_2 (121,101 bp) |
|
Accession No. (*NCBI) | CP102547 | CP102548 | CP102553 | CP102555 | JAOAOE010000005 | JAOAOE010000006 | JAOAOE010000009 | CP101878 | CP101880 | CP101881 | CP102988 | CP102989 | CP102990 | CP102991 | CP102994 | CP102995 |
Plasmid replicon types | IncFIB(pQil) IncFII(K) |
IncFIA IncFIB IncFII |
IncFIA(HI1) IncR |
IncN2 | IncFII | IncN | ColKP3 | IncFIA IncFIB IncFII |
IncFII | ColKP3 | IncFIB(K) | IncC | Unknown | ColKP3 | IncFIB(pQil) IncFII(K) |
IncFIB(K) IncHI1B |
Resistance genes | ||||||||||||||||
β-lactam |
bla
CTX-M-15
bla TEM-1A bla OXA-9 |
bla NDM-1 |
bla
CTX-M-15
bla TEM-1B bla OXA-1 bla SHV-12 |
bla NDM-1 | bla TEM-1B | bla OXA-232 | bla OXA-48 | bla OXA-232 | bla DHA-1 | bla CMY-2 |
bla
TEM-1B
bla CTX-M-3 |
bla OXA-232 | bla NDM-1 | |||
Aminoglycoside |
aadA1
aac(6′)-Ib |
aadA2 |
aph(3″)-Ib
aac(3)-IIa aph(6)-Id |
aac(3)-VIa aadA1 |
aadA2 | aph(3′)-Ia |
aac(6′)-Ib3
aph(6)-Id aph(3″)-Ib ant(2″)-Ia aac(6′)-Ip |
aadA16
rmtB |
rmtF | |||||||
Quinolones |
qnrB1
aac(6′)-Ib-cr |
aac(6′)-Ib-cr | qnrS1 |
qepA1
qepA2 qepA4 |
qnrB4 |
qnrVC4
aac(6′)-Ib-cr |
qnrS1 |
qnrB1
aac(6′)-Ib-cr |
||||||||
Trimethoprim | dfrA12 | dfrA14 | dfrA12 | dfrA27 | ||||||||||||
Sulphonamide | sul1 | sul2 | sul1 | sul2 | sul1 | |||||||||||
Tetracycline | tet(B) |
tet(A)
tet(D) |
tet(B) |
tet(A)
tet(M) |
tet(D) | |||||||||||
Phenicol |
catB3
catA2 |
floR
cmlA1 |
catA1 | |||||||||||||
Colistin | mcr-3.5 | |||||||||||||||
Macrolide | mph(A) | |||||||||||||||
Rifampicin | ARR-3 | ARR-2 | ||||||||||||||
Biocide | qacE | qacE | qacE | qacL | qacE |
*National Center for Biotechnology Information database.