Deposited data |
|
Genome-wide association study summary statistics |
CHARGE dbGaP and http://enigma.ini.usc.edu/research/download-enigma-gwas-results
|
phs000930 (dbGaP accession number) |
|
Software and algorithms |
|
EasyQC |
Winkler et al.51
|
Software - Universität Regensburg (uni-regensburg.de) |
METAL |
Willer et al.52
|
METAL Documentation - Genome Analysis Wiki (umich.edu) |
LD score regression |
Bulik-Sullivan et al.53
|
GitHub - bulik/ldsc: LD Score Regression (LDSC) |
LocusZoom |
Pruim et al.54
|
LocusZoom - Create Plots of Genetic Data |
FUMA GWAS |
Watanabe et al.55
|
Functional Mapping and Annotation of Genome-wide association studies (ctglab.nl) |
TWAS-Fusion |
Gusev et al.56
|
TWAS/FUSION (gusevlab.org) |
DOMINO |
Quinodoz et al.57
|
Domino (iob.ch) |
|
Other |
|
OMIM database |
Amberger et al.58
|
Home - OMIM |
Cortical organoids’ scRNA-seq data |
Bhaduri et al.34
|
https://organoidreportcard.cells.ucsc.edu |
e/sQTLs, and allele-specific expression in cultured primary human neural progenitors and their sorted neuronal progeny |
Aygün et al.32
|
https://bitbucket.org/steinlabunc/expression_splicing_qtls_public/src/master/ |