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. 2024 May 3;5(5):101529. doi: 10.1016/j.xcrm.2024.101529
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Genome-wide association study summary statistics CHARGE dbGaP and http://enigma.ini.usc.edu/research/download-enigma-gwas-results phs000930 (dbGaP accession number)

Software and algorithms

EasyQC Winkler et al.51 Software - Universität Regensburg (uni-regensburg.de)
METAL Willer et al.52 METAL Documentation - Genome Analysis Wiki (umich.edu)
LD score regression Bulik-Sullivan et al.53 GitHub - bulik/ldsc: LD Score Regression (LDSC)
LocusZoom Pruim et al.54 LocusZoom - Create Plots of Genetic Data
FUMA GWAS Watanabe et al.55 Functional Mapping and Annotation of Genome-wide association studies (ctglab.nl)
TWAS-Fusion Gusev et al.56 TWAS/FUSION (gusevlab.org)
DOMINO Quinodoz et al.57 Domino (iob.ch)

Other

OMIM database Amberger et al.58 Home - OMIM
Cortical organoids’ scRNA-seq data Bhaduri et al.34 https://organoidreportcard.cells.ucsc.edu
e/sQTLs, and allele-specific expression in cultured primary human neural progenitors and their sorted neuronal progeny Aygün et al.32 https://bitbucket.org/steinlabunc/expression_splicing_qtls_public/src/master/