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. 2024 May 13;5(5):101569. doi: 10.1016/j.xcrm.2024.101569
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

SLE and control plasma or serum samples Patients and healthy control subjects N/A

Critica commercia assays

HEK-BlueTM IFN-α/β cells InvivoGen Cat# hkb-ifnab; RRID: CVCL_KT26
HEK-Blue™ IFN-γ cells InvivoGen Cat# hkb-ifng; RRID: CVCL_UF30
HEK-Blue™ IFN-λ cells InvivoGen Cat# hkb-ifnl
QUANTI-Blue™ InvivoGen Cat# rep-qb1
IFN-α6 PBL Cat# 11165
IFN-γ PeproTech Cat# 300-02
IFN-λ3 (IL-28B) Gibco Cat# PHC0894

Deposited data

Whole blood gene expression data by microarray Gene expression Omnibus GSE45291; GSE121239

Softwareand algorithms

Oligo https://bioconductor.org/packages/release/bioc/html/oligo.html Ver. 1.6.6
Genefilter https://bioconductor.org/packages/release/bioc/html/genefilter.html Ver. 1.84
Limma https://bioconductor.org/packages/release/bioc/html/limma.html Ver. 3.58.1
Metascape.org https://metascape.org/ v3.5.20240101
Complexheatmap https://bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html Ver. 2.19.0
WGCNA https://cran.r-project.org/web/packages/WGCNA/index.html Ver. 1.72–5
Cytoscape https://cytoscape.org/ Ver. 3.10.2
STRING https://apps.cytoscape.org/apps/stringapp Ver. 2.0.3
rptR https://github.com/mastoffel/rptR Ver.0.9.1
Brms https://github.com/paul-buerkner/brms/ Ver.2.21.0
Lme4 https://github.com/lme4/lme4 Ver. 1.1–14
nnet https://cran.r-project.org/web/packages/nnet/index.html Ver. 7.3–19