TABLE 5.
Amino acid divergence in gB sequences in macaque rhadinovirus isolates and KSHVa
| gB sequence | No. of amino acid difference vs. sequence of:
|
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RRV26-95 | RRV492-98 | RRV309-95 | RRV17577 | CRV27-97 | CRV472-97 | CRV23-97 | PMRV98126 | PMRV19545 | KSHV | |
| RRV26-95 | ||||||||||
| RRV492-98 | 0.5 | |||||||||
| RRV309-95 | 2.4 | 2.9 | ||||||||
| RRV17577 | 2.1 | 2.5 | 0.4 | |||||||
| CRV27-97 | 4.3 | 4.4 | 3.6 | 3.3 | ||||||
| CRV472-97 | 4.3 | 4.5 | 3.8 | 3.4 | 0.1 | |||||
| CRV23-97 | 4.2 | 4.5 | 3.8 | 3.4 | 0.2 | 0.1 | ||||
| PMRV98126 | 5.6 | 5.5 | 6.1 | 5.7 | 6.0 | 6.1 | 6.0 | |||
| PMRV19545 | 7.2 | 7.0 | 6.7 | 6.3 | 6.3 | 6.5 | 6.4 | 1.8 | ||
| KSHV | 25.3 | 25.2 | 26.0 | 25.7 | 27.2 | 27.4 | 27.4 | 26.6 | 27.4 | |
a
Pairwise comparisons were made by using full-length gB amino acid sequences (823 to 829 amino acids). Divergence between sequences was calculated by Gap analysis (GCG software). The numbers indicate the percentage of amino acid difference between the macaque rhadinovirus and KSHV gB sequences. KSHV, RRV26-95, and RRV17577 gB sequences were obtained from GenBank.