Skip to main content
. 2008 Oct 3;99(10):1924–1932. doi: 10.1111/j.1349-7006.2008.00947.x

Table 1.

Sequences of γ‐synuclein gene‐specific primers

Primer Sequence (5’‐3’) Product size (bp)
RT‐PCR primers 17
γ‐synuclein‐RT‐5′ CAAGAAGGGCTTCTCCATCGCCAAGG 338 (60 to 397)
γ‐synuclein‐RT‐3′ CCTCTTTCTCTTTGGATGCCACACCC
GAPDH‐RT‐5′ GAAGGTGAAGGTCGGAGTC 226 (108 to 333)
GAPDH‐RT‐3′ GAAGATGGTGATGGGATTTC
Real‐time RT‐PCR primers
γ‐synuclein‐Real‐RT‐5′ GGAGGACTTGAGGCCATCTG 73 (339 to 411)
γ‐synuclein‐Real‐RT‐3′ CTCCTCTGCCACTTCCTCTTTC
GAPDH‐Real‐RT‐5′ GGACCTGACCTGCCGTCTAG 100 (831 to 930)
GAPDH‐Real‐RT‐3′ GTAGCCCAGGATGCCCTTGA
Bisulfite sequencing PCR primers 18
γ‐synuclein‐SF GGTTGAGTTAGTAGGAGTTTA 415 (−275 to +140)
γ‐synuclein‐SR CCTACCATACCCCACTTACCC
Nested MSP primers 18
Methylated γ‐synuclein‐MF TCGTATTAATATTTTATCGGCGT 194 (−139 to +55)
γ‐synuclein‐MR CCGCACCCACCACGCCCTCCTTAACGA
Unmethylated γ‐synuclein‐UF TTGGTGTTAATAGGAGGTATTGGGGATAGTTGTTGTG 177 (−123 to +54)
γ‐synuclein‐UR CACACCCACCACACCCTCCTTAACAAT
Real‐time Q‐MSP primers
Methylated γ‐synuclein‐Real‐MF TTCGTATTAATATTTTATCGGCGT 104 (−140 to −37)
γ‐synuclein‐Real‐MR GAAACTAAATCTCCCTACGAACTACG
Unmethylated γ‐synuclein‐Real‐UF GGTTTTTGTATTAATATTTTATTGGTG 110 (−144 to −35)
γ‐synuclein‐Real‐UR ACAAAACTAAATCTCCCTACAAACTACAA
WT primers 18
γ‐synuclein‐WF ACGCAGGGCTGGCTGGGCTCCA 242 (−169 to +73)
γ‐synuclein‐WR CCTGCTTGGTCTTTTCCACC

The CpG sites within the primer sequences are underlined