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Table 2.

Positions and sequences of the primers used for polymerase chain reaction (PCR) amplification and sequencing

Position Nucleotide sequence (5′–3′) Polarity
PCR primer
p1 : 1821–1841 TTTTTCACCTCTGCCTAATCA Sense
p2 : 1825–1806 AAAAAGTTGCATGGTGCTGG Antisense
p3 : 1922–1940 GAATTTGGAGCTTCTGTGG Sense
p4 : 1788–1771 GCCTACAGCCTCCTAGTA Antisense
p5 : 1604–1623 TCGCATGGAGACCACCGTGA Sense
p6 : 2076–60 ATAGCTTGCCTGAGTGC Antisense
p7 : 1653–1672 CATAAGAGGACTCTTGGACT Sense
p8 : 1974–1957 GGAAAGAAGTCAGAAGGC Antisense
Sequencing primer
242–258 CAGAGTCTAGACTCGTGG Sense
687–668 GGCACTAGTAAACTGAGCCA Antisense
456–475 AAGGTATGTTGCCCGTTTGT Sense
771–752 TACAGACTTGGCCCCCAATA Antisense
668–687 TGGCTCAGTTTACTAGTGCC Sense
1103–1086 GGCGAGAAAGTGAAAGCC Antisense
1054–1073 ATGCCTTTATATGCATGTAT Sense
1436–1418 GACGGGACGTAGACAAAGG Antisense
1267–1285 CATACTGCGGAACTCCTAGC Sense
2470–2453 TTATGAGTCCAAGGGATA Antisense
2301–2320 CACCAAATGCCCCTATCTTA Sense
2656–2639 GGATAGAACCTAGCAGGC Antisense
2637–2656 ATGCCTGCTAGGTTCTATCC Sense
3155–3138 CTTCCTGACTGCCGATTG Antisense
3082–3099 CCTCAGGCTCAGGGCATA Sense
475–456 ACAAACGGGCAACATACCTT Antisense

Nucleotide position based on the sequence of hepatitis B virus (HBV) genotype C (accession no. X01587). Primers p3 to p8 were also used for sequencing.