Table 3.
Validation of gene expression data obtained using the genechip system
Gene | No. ‘present’ | r † | P‐value |
---|---|---|---|
ABCC1 | 30 | 0.727 | <0.001*** |
NT5E | 26 | 0.933 | <0.001*** |
THBS1 | 22 | 0.917 | <0.001*** |
PTGS2 | 17 | 0.909 | <0.001*** |
MYB | 20 | 0.887 | <0.001*** |
UPP1 | 16 | 0.875 | <0.001*** |
CDA | 12 | 0.866 | <0.001*** |
ABCC3 | 17 | 0.861 | <0.001*** |
CYR61 | 20 | 0.859 | <0.001*** |
CNN3 | 26 | 0.858 | <0.001*** |
TP53 | 27 | 0.854 | <0.001*** |
ABCC4 | 18 | 0.846 | <0.001*** |
ECGF1 | 28 | 0.842 | <0.001*** |
GSTP1 | 30 | 0.826 | <0.001*** |
ABCC2 | 2 | 0.817 | <0.001*** |
GSTT1 | 7 | 0.807 | <0.001*** |
DPYD | 21 | 0.795 | <0.001*** |
GGH | 30 | 0.763 | <0.001*** |
BRCA1 | 26 | 0.750 | <0.001*** |
TYMS | 30 | 0.748 | <0.001*** |
ATP7B | 28 | 0.733 | <0.001*** |
SLCO2B1 | 6 | 0.729 | <0.001*** |
SLC19A3 | 2 | 0.687 | <0.001*** |
RPLP0 | 30 | 0.678 | <0.001*** |
MTHFD2 | 30 | 0.660 | <0.001*** |
E2F1 | 30 | 0.658 | <0.001*** |
POLA | 24 | 0.654 | <0.001*** |
PCNA | 30 | 0.639 | <0.001*** |
SHMT2 | 30 | 0.628 | <0.001*** |
POLB | 26 | 0.626 | <0.001*** |
FOLR1 | 14 | 0.610 | <0.001*** |
SHMT1 | 2 | 0.599 | <0.001*** |
DCTD | 30 | 0.591 | <0.001*** |
UNG | 30 | 0.584 | <0.001*** |
DCK | 30 | 0.563 | 0.001** |
RRM1 | 30 | 0.559 | 0.001** |
TOP2A | 30 | 0.555 | 0.001** |
VEGFB | 19 | 0.550 | 0.002** |
GCLC | 30 | 0.539 | 0.002** |
RRM2 | 30 | 0.519 | 0.003** |
DUT | 30 | 0.483 | 0.007** |
MTR | 29 | 0.476 | 0.008** |
MFTC | 30 | 0.466 | 0.009** |
GART | 30 | 0.462 | 0.010* |
AMT | 8 | 0.457 | 0.011* |
NME1 | 30 | 0.457 | 0.011* |
CAD | 29 | 0.456 | 0.011* |
DTYMK | 24 | 0.452 | 0.012* |
TOP1 | 30 | 0.450 | 0.012* |
ERCC1 | 20 | 0.450 | 0.013* |
ATIC | 30 | 0.443 | 0.014* |
LIG3 | 17 | 0.438 | 0.015* |
ITPA | 25 | 0.423 | 0.020* |
DHFR | 29 | 0.421 | 0.020* |
CTPS | 30 | 0.417 | 0.022* |
CTPS2 | 30 | 0.413 | 0.023* |
MTHFD1 | 30 | 0.394 | 0.031* |
POLD1 | 22 | 0.329 | 0.076 |
AK5 | 1 | 0.314 | 0.091 |
ENTPD1 | 0 | 0.180 | 0.341 |
FOLR2 | 1 | 0.128 | 0.499 |
TNFSF6 | 1 | 0.128 | 0.500 |
GPR44 | 0 | 0.113 | 0.552 |
UMPS | 30 | 0.078 | 0.680 |
MTHFR | 1 | −0.026 | 0.892 |
r: Pearson's correlation coefficient.
P < 0.001.
P < 0.01.
P < 0.05.