Table 3.
SNP no. | SNP ID | Genotype | Cases | Controls | P‐value* | Adjusted OR (95% CI) † | ||
---|---|---|---|---|---|---|---|---|
n | % | n | % | |||||
1 | rs6672420 | TT | 149 | 47.7 | 161 | 49.4 | 0.290 | 1.00 (ref.) |
TA | 130 | 41.7 | 142 | 43.6 | 1.00 (0.72–1.39) | |||
AA | 33 | 10.6 | 23 | 7.0 | 1.64 (0.91–2.93) | |||
2 | rs11249208 | AA | 162 | 51.9 | 175 | 53.9 | 0.874 | 1.00 (ref.) |
AG | 133 | 42.6 | 134 | 41.2 | 1.08 (0.78–1.50) | |||
GG | 17 | 5.5 | 16 | 4.9 | 1.21 (0.59–2.49) | |||
3 | rs11249206 | TT | 60 | 19.3 | 119 | 36.5 | <0.001 | 1.00 (ref.) |
TC | 212 | 68.2 | 162 | 49.7 | 2.61 (1.79–3.80) | |||
CC | 39 | 12.5 | 45 | 13.8 | 1.75 (1.03–2.99) | |||
4 | rs7551188 | TT | 96 | 30.8 | 102 | 31.3 | 0.107 | 1.00 (ref.) |
CT | 178 | 57.0 | 166 | 50.9 | 1.11 (0.78–1.58) | |||
CC | 38 | 12.2 | 58 | 17.8 | 0.69 (0.42–1.13) | |||
5 | rs1395621 | CC | 104 | 33.3 | 115 | 35.0 | 0.491 | 1.00 (ref.) |
CT | 154 | 49.4 | 148 | 45.0 | 1.13 (0.80–1.61) | |||
TT | 54 | 17.3 | 66 | 20.0 | 0.92 (0.59–1.45) | |||
6 | rs906296 | GG | 175 | 56.1 | 171 | 52.6 | 0.520 | 1.00 (ref.) |
GC | 118 | 37.8 | 137 | 42.2 | 0.85 (0.61–1.17) | |||
CC | 19 | 6.1 | 17 | 5.2 | 1.06 (0.53–2.12) | |||
7 | rs760805 | TT | 47 | 15.1 | 67 | 20.4 | 0.022 | 1.00 (ref.) |
AT | 151 | 48.4 | 173 | 52.6 | 1.21 (0.78–1.88) | |||
AA | 114 | 36.5 | 89 | 27.0 | 1.82 (1.14–2.92) | |||
8 | rs2236852 | AA | 42 | 13.5 | 81 | 24.8 | <0.001 | 1.00 (ref.) |
GA | 187 | 59.9 | 146 | 44.8 | 2.49 (1.61–3.84) | |||
GG | 83 | 26.6 | 99 | 30.4 | 1.69 (1.05–2.72) | |||
9 | rs9438876 | AA | 158 | 50.6 | 164 | 49.8 | 0.974 | 1.00 (ref.) |
AG | 130 | 41.7 | 140 | 42.6 | 0.96 (0.69–1.33) | |||
GG | 24 | 7.7 | 25 | 7.6 | 0.97 (0.53–1.78) | |||
10 | rs2282718 | GG | 115 | 36.8 | 129 | 39.6 | 0.388 | 1.00 (ref.) |
GA | 155 | 49.7 | 145 | 44.5 | 1.20 (0.85–1.69) | |||
AA | 42 | 13.5 | 52 | 15.9 | 0.89 (0.55–1.44) |
Two‐sided χ2 test for the frequency distribution.
Adjusted for age, sex, smoking status, and alcohol use.