Table 2.
ONCOMINE database | CGH database (144 breast cancer cases) | Comments | ||||
---|---|---|---|---|---|---|
Protein name | Accession no. | Chromosome | No. cases | Amplification (n) | Deletion (n) | |
CIQBP | Q07021 | 17p13.3 | 47 | 0 | 47 | Down in tumors versus normal |
FBL | P22087 | 19q13.2 | 29 | 3 | 26 | Down in tumors versus normal |
RPS8 | P62241 | 1p34.1 | 26 | 2 | 24 | Down in relapsed tumors |
RPS7 | P62081 | 2p25.3 | 9 | 7 | 2 | Up with grades |
RPS4X | P62701 | Xq13.1 | 46 | 41 | 5 | Up in tumors versus normal |
HADHB | B4DDC9 | 2p23 | 10 | 8 | 2 | Up with grades |
VPS39 | B3KY10 | 15q15.1 | 10 | 1 | 9 | Down in poor differentiated tumors |
RPL31 | B2R4C1 | 2q11.2 | 13 | 12 | 1 | Up with grades |
MRPL9 | Q9BYD2 | 1q21.3 | 55 | 55 | 0 | Up in tumors versus normal |
CLUL1 | Q15846 | 2q11.2 | 13 | 12 | 1 | Up in tumors versus normal |
RPL23A | A8MUS3 | 17p11.2 | 32 | 3 | 29 | Down in tumors versus normal |
MRPS22 | A8K9Y7 | 3q23 | 12 | 11 | 1 | Up with grades |
NDUFS3 | B4DFM8 | 11p11.2 | 10 | 3 | 7 | Down in tumors versus normal |
RB1CC1 | A8K6N4 | 8q11.23 | 34 | 30 | 4 | Up with grades |
RIBC2 | Q9H4K1 | 22q13.31 | 33 | 32 | 1 | Up with grades |
HNRNPK | P61978 | 9q21.32 | 7 | 2 | 5 | Down in tumors versus normal |
HNRNPR | O43390 | 1p36.12 | 25 | 2 | 23 | Down with survival (death) |
DAP3 | P51398 | 1q22 | 57 | 57 | 0 | Up in tumors versus normal |
MRPL19 | P49406 | 2p12 | 18 | 16 | 2 | Up in tumors versus normal |
PABPC1 | P11940 | 8q22.3 | 47 | 45 | 2 | Up in tumors versus normal |
MRPS28 | Q53G62 | 8q21.3 | 49 | 46 | 3 | Up with bad prognosis |
HNRNPL | A6ND69 | 19q13.2 | 29 | 3 | 26 | Down in tumors versus normal |
RALYL | O60812 | 8q21.2 | 63 | 59 | 4 | Up in tumors versus normal |
MRPL13 | Q9BYD1 | 8q24.12 | 47 | 46 | 1 | Up in tumors versus normal |
MRPS7 | Q9Y2R9 | 17q25.1 | 37 | 19 | 18 | Up in tumors versus normal |
CGH, comparative genomic hybridization.